Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00038847 |
| length | 901 |
| RNA type | mRNA |
| GC content | 0.56 |
| exon number | 3 |
| gene id | XLOC_019732 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007132.7 |
| NCBI id | CM002905.2 |
| chromosome length | 45934066 |
| location | 32476709 ~ 32487084 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0010506 | regulation of autophagy | biological_process |
| GO:0005739 | mitochondrion | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-031204-23 | Predicted to be involved in regulation of autophagy. Predicted to be active in mitochondrion. Is expressed in nervous system; neural tube; and trigeminal placode. |
| ensembl_id | ENSDART00000131477 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00038840 | lncRNA | downstream | 103121 | 32354582 ~ 32374523 (-) | True | XLOC_019729 |
| TCONS_00038837 | lncRNA | downstream | 176548 | 32285471 ~ 32301096 (-) | False | XLOC_019728 |
| TCONS_00038838 | lncRNA | downstream | 176576 | 32288724 ~ 32301068 (-) | True | XLOC_019728 |
| TCONS_00038835 | lncRNA | downstream | 192081 | 32280911 ~ 32285563 (-) | False | XLOC_019728 |
| TCONS_00039252 | lncRNA | downstream | 199302 | 32126914 ~ 32278342 (-) | True | XLOC_019727 |
| TCONS_00038851 | lncRNA | upstream | 64897 | 32551981 ~ 32555647 (-) | True | XLOC_019733 |
| TCONS_00039669 | lncRNA | upstream | 168873 | 32655957 ~ 32660440 (-) | True | XLOC_019734 |
| TCONS_00038857 | lncRNA | upstream | 571541 | 33058625 ~ 33082127 (-) | False | XLOC_019737 |
| TCONS_00038858 | lncRNA | upstream | 571541 | 33058625 ~ 33090204 (-) | False | XLOC_019737 |
| TCONS_00039670 | lncRNA | upstream | 571669 | 33058753 ~ 33076654 (-) | False | XLOC_019737 |
| TCONS_00038843 | mRNA | downstream | 9845 | 32457448 ~ 32467799 (-) | False | XLOC_019731 |
| TCONS_00038844 | mRNA | downstream | 9845 | 32457466 ~ 32467799 (-) | False | XLOC_019731 |
| TCONS_00038842 | mRNA | downstream | 10545 | 32454896 ~ 32467099 (-) | False | XLOC_019731 |
| TCONS_00038845 | mRNA | downstream | 14788 | 32458224 ~ 32462856 (-) | True | XLOC_019731 |
| TCONS_00038841 | mRNA | downstream | 40965 | 32390707 ~ 32436679 (-) | True | XLOC_019730 |
| TCONS_00038849 | mRNA | upstream | 21824 | 32508908 ~ 32684570 (-) | False | XLOC_019733 |
| TCONS_00038850 | mRNA | upstream | 25903 | 32512987 ~ 32680638 (-) | False | XLOC_019733 |
| TCONS_00038852 | mRNA | upstream | 270517 | 32757601 ~ 32781612 (-) | True | XLOC_019735 |
| TCONS_00038854 | mRNA | upstream | 519566 | 33006650 ~ 33032715 (-) | False | XLOC_019736 |
| TCONS_00038853 | mRNA | upstream | 519566 | 33006650 ~ 33032715 (-) | False | XLOC_019736 |
| TCONS_00038828 | other | downstream | 395495 | 32076707 ~ 32082149 (-) | True | XLOC_019725 |
| TCONS_00038827 | other | downstream | 396266 | 32073529 ~ 32081378 (-) | False | XLOC_019725 |
| TCONS_00038821 | other | downstream | 1139859 | 31337670 ~ 31337785 (-) | True | XLOC_019722 |
| TCONS_00038809 | other | downstream | 1483095 | 30974165 ~ 30994549 (-) | True | XLOC_019715 |
| TCONS_00038807 | other | downstream | 1589270 | 30886127 ~ 30888374 (-) | True | XLOC_019714 |
| TCONS_00038861 | other | upstream | 649864 | 33136948 ~ 33137083 (-) | True | XLOC_019739 |
| TCONS_00038875 | other | upstream | 1943376 | 34430460 ~ 34536374 (-) | True | XLOC_019748 |
| TCONS_00038902 | other | upstream | 4585867 | 37072951 ~ 37073080 (-) | True | XLOC_019765 |
| TCONS_00038929 | other | upstream | 5576113 | 38063197 ~ 38063314 (-) | True | XLOC_019777 |
| TCONS_00038943 | other | upstream | 6240015 | 38727099 ~ 38730018 (-) | False | XLOC_019784 |
