Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00038979 |
| length | 1229 |
| lncRNA type | sense_over |
| GC content | 0.36 |
| exon number | 3 |
| gene id | XLOC_019808 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007132.7 |
| NCBI id | CM002905.2 |
| chromosome length | 45934066 |
| location | 40139036 ~ 40174677 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0055085 | transmembrane transport | biological_process |
| GO:0006811 | ion transport | biological_process |
| GO:0015721 | bile acid and bile salt transport | biological_process |
| GO:0043252 | sodium-independent organic anion transport | biological_process |
| GO:0005887 | integral component of plasma membrane | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0015347 | sodium-independent organic anion transmembrane transporter activity | molecular_function |
| GO:0015125 | bile acid transmembrane transporter activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00038976 | lncRNA | downstream | 6180 | 40157865 ~ 40160887 (-) | False | XLOC_019808 |
| TCONS_00039260 | lncRNA | downstream | 242623 | 39923770 ~ 39924444 (-) | True | XLOC_019802 |
| TCONS_00039259 | lncRNA | downstream | 254960 | 39905903 ~ 39912107 (-) | True | XLOC_019801 |
| TCONS_00039258 | lncRNA | downstream | 503688 | 39653591 ~ 39663379 (-) | True | XLOC_019800 |
| TCONS_00039257 | lncRNA | downstream | 562455 | 39603566 ~ 39604612 (-) | True | XLOC_019798 |
| TCONS_00039689 | lncRNA | upstream | 74465 | 40249111 ~ 40250025 (-) | False | XLOC_019809 |
| TCONS_00039261 | lncRNA | upstream | 74465 | 40249111 ~ 40250025 (-) | True | XLOC_019809 |
| TCONS_00038988 | lncRNA | upstream | 202860 | 40377506 ~ 40384101 (-) | True | XLOC_019812 |
| TCONS_00039690 | lncRNA | upstream | 354141 | 40528787 ~ 40532423 (-) | False | XLOC_019814 |
| TCONS_00039008 | lncRNA | upstream | 847187 | 41021833 ~ 41024938 (-) | False | XLOC_019823 |
| TCONS_00038970 | mRNA | downstream | 83500 | 40053666 ~ 40083567 (-) | False | XLOC_019807 |
| TCONS_00038971 | mRNA | downstream | 83635 | 40054129 ~ 40083432 (-) | False | XLOC_019807 |
| TCONS_00038969 | mRNA | downstream | 117425 | 40045224 ~ 40049642 (-) | True | XLOC_019806 |
| TCONS_00038968 | mRNA | downstream | 126889 | 40021263 ~ 40040178 (-) | True | XLOC_019805 |
| TCONS_00038967 | mRNA | downstream | 151537 | 39992151 ~ 40015530 (-) | True | XLOC_019804 |
| TCONS_00038980 | mRNA | upstream | 73474 | 40248120 ~ 40250500 (-) | False | XLOC_019809 |
| TCONS_00038981 | mRNA | upstream | 139231 | 40313877 ~ 40317054 (-) | False | XLOC_019810 |
| TCONS_00038982 | mRNA | upstream | 139360 | 40314006 ~ 40317035 (-) | True | XLOC_019810 |
| TCONS_00038983 | mRNA | upstream | 163387 | 40338033 ~ 40348790 (-) | True | XLOC_019811 |
| TCONS_00038984 | mRNA | upstream | 178897 | 40353543 ~ 40398932 (-) | False | XLOC_019812 |
| TCONS_00038972 | other | downstream | 85138 | 40077951 ~ 40081929 (-) | True | XLOC_019807 |
| TCONS_00038955 | other | downstream | 899761 | 39267225 ~ 39267306 (-) | True | XLOC_019791 |
| TCONS_00038943 | other | downstream | 1437049 | 38727099 ~ 38730018 (-) | False | XLOC_019784 |
| TCONS_00038929 | other | downstream | 2103753 | 38063197 ~ 38063314 (-) | True | XLOC_019777 |
| TCONS_00038902 | other | downstream | 3093987 | 37072951 ~ 37073080 (-) | True | XLOC_019765 |
| TCONS_00038990 | other | upstream | 228614 | 40403260 ~ 40411647 (-) | True | XLOC_019813 |
| TCONS_00039012 | other | upstream | 1076785 | 41251431 ~ 41251548 (-) | True | XLOC_019825 |
| TCONS_00039016 | other | upstream | 1176899 | 41351545 ~ 41351665 (-) | True | XLOC_019828 |
| TCONS_00039031 | other | upstream | 1689008 | 41863654 ~ 41873097 (-) | True | XLOC_019836 |
| TCONS_00039061 | other | upstream | 3215755 | 43390401 ~ 43393079 (-) | True | XLOC_019853 |
