Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00044599 |
| length | 717 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 6 |
| gene id | XLOC_022655 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007134.7 |
| NCBI id | CM002907.2 |
| chromosome length | 46223584 |
| location | 44667616 ~ 44677315 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007018 | microtubule-based movement | biological_process |
| GO:0005871 | kinesin complex | cellular_component |
| GO:0005874 | microtubule | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0003777 | microtubule motor activity | molecular_function |
| GO:0008017 | microtubule binding | molecular_function |
| GO:0016887 | ATPase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-090312-119 | Predicted to enable ATP hydrolysis activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in microtubule-based movement. Predicted to be part of kinesin complex. Predicted to be active in microtubule. Human ortholog(s) of this gene implicated in spastic ataxia 2. Orthologous to human KIF1C (kinesin family member 1C). |
| ensembl_id | ENSDART00000143054 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00044595 | lncRNA | downstream | 101847 | 44553680 ~ 44565769 (-) | False | XLOC_022652 |
| TCONS_00045170 | lncRNA | downstream | 103065 | 44553065 ~ 44564551 (-) | False | XLOC_022652 |
| TCONS_00044602 | lncRNA | upstream | 110652 | 44787967 ~ 44794145 (-) | False | XLOC_022658 |
| TCONS_00044604 | lncRNA | upstream | 110652 | 44787967 ~ 44794157 (-) | False | XLOC_022658 |
| TCONS_00045171 | lncRNA | upstream | 110652 | 44787967 ~ 44794286 (-) | False | XLOC_022658 |
| TCONS_00044603 | lncRNA | upstream | 110652 | 44787967 ~ 44794448 (-) | True | XLOC_022658 |
| TCONS_00045172 | lncRNA | upstream | 146768 | 44824083 ~ 44838839 (-) | False | XLOC_022660 |
| TCONS_00044598 | mRNA | downstream | 89731 | 44575669 ~ 44577885 (-) | True | XLOC_022654 |
| TCONS_00044597 | mRNA | downstream | 93557 | 44567210 ~ 44574059 (-) | True | XLOC_022653 |
| TCONS_00044590 | mRNA | downstream | 121464 | 44536926 ~ 44546152 (-) | False | XLOC_022651 |
| TCONS_00044591 | mRNA | downstream | 121492 | 44537368 ~ 44546124 (-) | True | XLOC_022651 |
| TCONS_00044588 | mRNA | downstream | 173128 | 44472414 ~ 44494488 (-) | False | XLOC_022649 |
| TCONS_00044600 | mRNA | upstream | 35273 | 44712588 ~ 44723102 (-) | True | XLOC_022656 |
| TCONS_00044601 | mRNA | upstream | 95346 | 44772661 ~ 44786844 (-) | True | XLOC_022657 |
| TCONS_00044605 | mRNA | upstream | 120350 | 44797665 ~ 44819100 (-) | True | XLOC_022659 |
| TCONS_00044608 | mRNA | upstream | 166545 | 44843860 ~ 44871987 (-) | False | XLOC_022661 |
| TCONS_00044609 | mRNA | upstream | 167402 | 44844717 ~ 44848961 (-) | False | XLOC_022661 |
| TCONS_00044578 | other | downstream | 657075 | 44010425 ~ 44010541 (-) | True | XLOC_022645 |
| TCONS_00044573 | other | downstream | 1136901 | 43530601 ~ 43530715 (-) | True | XLOC_022637 |
| TCONS_00044564 | other | downstream | 1541670 | 43021194 ~ 43125946 (-) | True | XLOC_022631 |
| TCONS_00044558 | other | downstream | 1791131 | 42836125 ~ 42876485 (-) | False | XLOC_022629 |
| TCONS_00044554 | other | downstream | 2152614 | 42508734 ~ 42515002 (-) | True | XLOC_022624 |
| TCONS_00044606 | other | upstream | 146768 | 44824083 ~ 44838825 (-) | False | XLOC_022660 |
| TCONS_00044607 | other | upstream | 149242 | 44826557 ~ 44829277 (-) | True | XLOC_022660 |
| TCONS_00044611 | other | upstream | 184537 | 44861852 ~ 44871940 (-) | False | XLOC_022661 |
| TCONS_00044612 | other | upstream | 184576 | 44861891 ~ 44879214 (-) | True | XLOC_022661 |
| TCONS_00044628 | other | upstream | 724962 | 45402277 ~ 45407642 (-) | False | XLOC_022672 |
