Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1554589 |
| length | 340 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 1 |
| gene id | G1360158 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 28789325 ~ 28789664 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1554585 | lncRNA | downstream | 1248 | 28787874 ~ 28788077 (-) | True | G1360154 |
| TU1554563 | lncRNA | downstream | 18517 | 28770542 ~ 28770808 (-) | True | G1360132 |
| TU1554433 | lncRNA | downstream | 181710 | 28607383 ~ 28607615 (-) | True | G1360003 |
| TU1554431 | lncRNA | downstream | 183378 | 28605738 ~ 28605947 (-) | True | G1360001 |
| TU1554429 | lncRNA | downstream | 190717 | 28598366 ~ 28598608 (-) | True | G1359999 |
| TU1554599 | lncRNA | upstream | 9467 | 28799131 ~ 28799478 (-) | True | G1360168 |
| TU1554600 | lncRNA | upstream | 11547 | 28801211 ~ 28801472 (-) | True | G1360169 |
| TU1554613 | lncRNA | upstream | 22383 | 28812047 ~ 28812283 (-) | True | G1360182 |
| TU1554633 | lncRNA | upstream | 34905 | 28824569 ~ 28824768 (-) | True | G1360202 |
| TU1554637 | lncRNA | upstream | 37233 | 28826897 ~ 28827136 (-) | True | G1360206 |
| XR_005036500.1 | mRNA | downstream | 22323 | 28626132 ~ 28767002 (-) | True | afap1l2 |
| XM_036946702.1 | mRNA | downstream | 22324 | 28626132 ~ 28767001 (-) | False | afap1l2 |
| XM_036946700.1 | mRNA | downstream | 22325 | 28626132 ~ 28767000 (-) | False | afap1l2 |
| XM_036946701.1 | mRNA | downstream | 22325 | 28626132 ~ 28767000 (-) | False | afap1l2 |
| XM_036946703.1 | mRNA | downstream | 24710 | 28626132 ~ 28764615 (-) | False | afap1l2 |
| XR_002468900.2 | mRNA | upstream | 622806 | 29412470 ~ 29423653 (-) | False | LOC110491794 |
| XR_002468901.2 | mRNA | upstream | 622806 | 29412470 ~ 29423653 (-) | False | LOC110491794 |
| XR_002468903.2 | mRNA | upstream | 622807 | 29412471 ~ 29423653 (-) | False | LOC110491794 |
| XM_021565563.2 | mRNA | upstream | 885153 | 29674817 ~ 29702593 (-) | True | LOC110491798 |
| XR_002469089.2 | mRNA | upstream | 1065513 | 29855177 ~ 29863073 (-) | False | LOC110492894 |
| TU1554186 | other | downstream | 608385 | 28177715 ~ 28180940 (-) | True | taok2b |
| TU1554168 | other | downstream | 625098 | 28163463 ~ 28164227 (-) | True | G1359763 |
| TU1553783 | other | downstream | 1261188 | 27527163 ~ 27528137 (-) | True | G1359412 |
| TU1553687 | other | downstream | 1429763 | 27357284 ~ 27359562 (-) | True | G1359321 |
| TU1553462 | other | downstream | 1675924 | 27112234 ~ 27113401 (-) | True | G1359119 |
| TU1555797 | other | upstream | 707449 | 29497113 ~ 29497555 (-) | True | G1361290 |
| TU1556170 | other | upstream | 1134207 | 29923871 ~ 29925154 (-) | True | G1361619 |
| TU1558520 | other | upstream | 2849773 | 31639437 ~ 31650697 (-) | True | G1363836 |
| TU1558829 | other | upstream | 3096085 | 31885749 ~ 31886112 (-) | True | G1364105 |
| TU1559113 | other | upstream | 3229130 | 32018794 ~ 32019498 (-) | True | G1364348 |
