RNA id: XR_005037155.1



Basic Information


Item Value
RNA id XR_005037155.1
length 107
RNA type mRNA
GC content 0.46
exon number 1
gene id LOC118940567
representative True

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 13925491 ~ 13925597 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


GTGCTCGCTtcggcagcacatatactaaaattggaacgatacagagaagattagcatggcccctgcgcaaggatgacacgcaaattcGTGAAGCGTTccttattttt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1627759 lncRNA downstream 8169 13917047 ~ 13917322 (-) True G1422139
TU1627753 lncRNA downstream 18855 13906151 ~ 13906636 (-) True G1422133
TU1627749 lncRNA downstream 22357 13902731 ~ 13903134 (-) False G1422131
TU1627760 lncRNA upstream 7613 13933210 ~ 13933527 (-) True G1422140
TU1627761 lncRNA upstream 9477 13935074 ~ 13935751 (-) True G1422141
TU1627773 lncRNA upstream 29423 13955020 ~ 13959127 (-) True G1422152
TU1627768 lncRNA upstream 34939 13960536 ~ 13960970 (-) False LOC110485459
TU1627782 lncRNA upstream 54850 13980447 ~ 13992216 (-) True G1422161
XR_005037153.1 mRNA downstream 2972 13922413 ~ 13922519 (-) True LOC118940565
XR_005037152.1 mRNA downstream 5992 13919393 ~ 13919499 (-) True LOC118940564
XR_005037151.1 mRNA downstream 9241 13916144 ~ 13916250 (-) True LOC118940563
XM_021556525.2 mRNA downstream 23499 13897852 ~ 13901992 (-) True LOC110485453
XM_036948068.1 mRNA downstream 46234 13872448 ~ 13879257 (-) True LOC110485450
XR_005037156.1 mRNA upstream 2970 13928567 ~ 13928673 (-) True LOC118940568
XM_036948045.1 mRNA upstream 34196 13959793 ~ 13969053 (-) False LOC110485459
XM_036948041.1 mRNA upstream 34196 13959793 ~ 13996720 (-) False LOC110485459
XM_036948044.1 mRNA upstream 34196 13959793 ~ 13996725 (-) False LOC110485459
XM_036948039.1 mRNA upstream 34196 13959793 ~ 13996726 (-) False LOC110485459
TU1627715 other downstream 56820 13866420 ~ 13868671 (-) True LOC118940029
TU1627736 other downstream 67241 13856876 ~ 13858250 (-) False G1422125
TU1627739 other downstream 67241 13856876 ~ 13858250 (-) False G1422125
TU1627740 other downstream 67241 13856876 ~ 13858250 (-) True G1422125
TU1627681 other downstream 144451 13772139 ~ 13781040 (-) True LOC118940035
TU1627772 other upstream 37110 13962707 ~ 13965337 (-) True LOC110485459
TU1627971 other upstream 350316 14275913 ~ 14277633 (-) False LOC110485493
TU1627976 other upstream 361569 14287166 ~ 14289013 (-) False LOC110485493
TU1627977 other upstream 361569 14287166 ~ 14289013 (-) False LOC110485493
TU1627978 other upstream 361569 14287166 ~ 14289013 (-) False LOC110485493