RNA id: TU1627985



Basic Information


Item Value
RNA id TU1627985
length 355
lncRNA type read_through
GC content 0.41
exon number 3
gene id G1422279
representative True

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 14298628 ~ 14302159 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gtagtagtagtagtagtagtagtagcagcagtagtagtagtagtagaggtagtagtagtagtagaagaggtagtagcagcagtagcagcagtagtagtagtagaggtagtagtagtagtagtagcagtagaggtagtagtagtagtagcagtagaggtagtagtagtagtagcagtagaggtagtagtagtagtagtagaggtagtagtagtagtagtagtagaggtagtagtagtagaggtagtagtagtagtagaggtagtagtagtagaggtagtagtagtagtagtagtagtagcagtagaggtagtagcagcagcagcagcagtagtagtagtagaggtagtagtagtag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1627980 lncRNA downstream 11571 14286354 ~ 14287057 (-) False LOC110485493
TU1627981 lncRNA downstream 22935 14275420 ~ 14275693 (-) True G1422275
TU1627946 lncRNA downstream 28565 14269448 ~ 14270063 (-) False G1422265
TU1627947 lncRNA downstream 28565 14269750 ~ 14270063 (-) True G1422265
TU1627948 lncRNA downstream 28972 14269448 ~ 14269656 (-) False G1422265
TU1627995 lncRNA upstream 20846 14323005 ~ 14347650 (-) True LOC110495053
TU1628001 lncRNA upstream 27957 14330116 ~ 14330705 (-) True G1422290
TU1628004 lncRNA upstream 44443 14346602 ~ 14346891 (-) True G1422293
TU1628005 lncRNA upstream 57201 14359360 ~ 14359744 (-) True G1422294
TU1628539 lncRNA upstream 77242 14379401 ~ 14380060 (-) True LOC110493419
XM_036947973.1 mRNA downstream 9469 14275862 ~ 14289159 (-) False LOC110485493
XM_036947976.1 mRNA downstream 9469 14275862 ~ 14289159 (-) False LOC110485493
XM_036947977.1 mRNA downstream 9469 14275862 ~ 14289159 (-) False LOC110485493
XM_036947979.1 mRNA downstream 9469 14282475 ~ 14289159 (-) False LOC110485493
XM_036947980.1 mRNA downstream 9469 14282475 ~ 14289159 (-) False LOC110485493
XM_036948126.1 mRNA upstream 45200 14347359 ~ 14371087 (-) False LOC110495053
XM_036948127.1 mRNA upstream 50447 14352606 ~ 14371087 (-) False LOC110495053
XM_021567675.2 mRNA upstream 77130 14379289 ~ 14382571 (-) False LOC110493419
XM_036947994.1 mRNA upstream 157179 14459338 ~ 14502251 (-) False LOC110485503
XM_036947993.1 mRNA upstream 157179 14459338 ~ 14503012 (-) False LOC110485503
TU1627976 other downstream 9615 14287166 ~ 14289013 (-) False LOC110485493
TU1627977 other downstream 9615 14287166 ~ 14289013 (-) False LOC110485493
TU1627978 other downstream 9615 14287166 ~ 14289013 (-) False LOC110485493
TU1627979 other downstream 9615 14287166 ~ 14289013 (-) True LOC110485493
TU1627971 other downstream 20995 14275913 ~ 14277633 (-) False LOC110485493
TU1628608 other upstream 289307 14591466 ~ 14592594 (-) True G1422757
TU1628669 other upstream 463372 14765531 ~ 14768638 (-) True G1422796
TU1628810 other upstream 624206 14926365 ~ 15353090 (-) False G1422891
TU1628852 other upstream 704680 15006839 ~ 15247342 (-) True LOC118940320
TU1628844 other upstream 1031719 15333878 ~ 15334891 (-) True G1422897

Expression Profile