RNA id: TCONS_00046702


Basic Information

Item Value
RNA id TCONS_00046702
length 420
RNA type mRNA
GC content 0.45
exon number 2
gene id XLOC_023662
representative False

Chromosome Information

Item Value
chromosome id NC_007135.7
NCBI id CM002908.2
chromosome length 42172926
location 38121403 ~ 38122121 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ATGTTGGGCTTTATTTTCACTCTGCTCATTCTGACACCAGCAGCTGCTGAAGTGGGTGTAAAAGTTCTGTTTCCAACCAAAACTGCAACCAGCAATGTTAAACTGACTCCTGATAAACCCCTAAATCTGTCAGCGTTTACTCTCTGCATGCGTGTGGCGACGGAGCTCCAGGGAGGGCAGGATGTCATTCTGTTCGCCTACCGCACACCTAATGCTGATGAAATCAATGTGTGGAGAGAGAAAGATGGCCGTTTGTCCATATATATTCAGTCTAACGATGAAGTATTTTTCCGTCTTCCCTCTCCCTCCTTATTTCAGACTCATCTGTGCGTGTCCTGGGAGTCTGCAACTGGTCTTACTGCTTTTTGGATTGATAAAAGTCGCAGTTTGTACCAGAATTACTGCAGGAAATGTATTTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000137056

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00046695 lncRNA downstream 28815 38085317 ~ 38092588 (-) True XLOC_023658
TCONS_00047257 lncRNA downstream 394454 37724974 ~ 37726949 (-) True XLOC_023652
TCONS_00047256 lncRNA downstream 413352 37705626 ~ 37708051 (-) True XLOC_023651
TCONS_00046681 lncRNA downstream 648432 37467001 ~ 37472971 (-) True XLOC_023645
TCONS_00047255 lncRNA downstream 826302 37289468 ~ 37295101 (-) True XLOC_023641
TCONS_00047259 lncRNA upstream 75918 38197838 ~ 38215482 (-) True XLOC_023667
TCONS_00046880 lncRNA upstream 89183 38211103 ~ 38212927 (-) False XLOC_023669
TCONS_00047260 lncRNA upstream 119254 38241174 ~ 38251085 (-) False XLOC_023670
TCONS_00047261 lncRNA upstream 119254 38241174 ~ 38252296 (-) True XLOC_023670
TCONS_00046719 lncRNA upstream 402073 38523993 ~ 38524619 (-) True XLOC_023675
TCONS_00046701 mRNA downstream 8195 38109814 ~ 38113208 (-) True XLOC_023661
TCONS_00046700 mRNA downstream 10624 38109799 ~ 38110779 (-) False XLOC_023661
TCONS_00046696 mRNA downstream 24098 38092608 ~ 38097305 (-) False XLOC_023659
TCONS_00046698 mRNA downstream 27321 38092610 ~ 38094082 (-) True XLOC_023659
TCONS_00046697 mRNA downstream 27329 38092610 ~ 38094074 (-) False XLOC_023659
TCONS_00046703 mRNA upstream 8684 38130604 ~ 38131381 (-) True XLOC_023663
TCONS_00046704 mRNA upstream 15553 38137473 ~ 38138307 (-) False XLOC_023664
TCONS_00046705 mRNA upstream 15587 38137507 ~ 38192003 (-) True XLOC_023664
TCONS_00046707 mRNA upstream 72216 38194136 ~ 38197040 (-) False XLOC_023666
TCONS_00046708 mRNA upstream 72403 38194323 ~ 38197040 (-) True XLOC_023666
TCONS_00046699 other downstream 21728 38098896 ~ 38099675 (-) True XLOC_023660
TCONS_00046678 other downstream 716937 37366431 ~ 37404466 (-) True XLOC_023644
TCONS_00046677 other downstream 754055 37361189 ~ 37367348 (-) False XLOC_023644
TCONS_00046660 other downstream 1820407 36295311 ~ 36300996 (-) True XLOC_023621
TCONS_00046633 other downstream 4005889 34112756 ~ 34115514 (-) True XLOC_023597
TCONS_00046706 other upstream 56041 38177961 ~ 38178027 (-) True XLOC_023665
TCONS_00046711 other upstream 89183 38211103 ~ 38212927 (-) False XLOC_023669
TCONS_00046712 other upstream 89363 38211283 ~ 38212872 (-) True XLOC_023669
TCONS_00046716 other upstream 249311 38371231 ~ 38384275 (-) True XLOC_023672
TCONS_00046717 other upstream 274652 38396572 ~ 38397488 (-) True XLOC_023673

Expression Profile

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