RNA id: TU1933087



Basic Information


Item Value
RNA id TU1933087
length 246
RNA type TUCP
GC content 0.52
exon number 2
gene id G1690092
representative False

Chromosome Information


Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 36264660 ~ 36264981 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence


gagagagagagatggacagagagagagagatggacagagagagagagatggacagagagagagagatggacagagagagacagagagatggacagagagagagagagagagagagagagatggacagagagggaggagagagatggacagagggaggagagagagatggacagagagagagatggacagagagagagagatggacagagagagagagatggacagagagggaggagagagatggac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU1933086 lncRNA upstream 1529 36261774 ~ 36263131 (+) True G1690091
TU1933084 lncRNA upstream 9324 36254816 ~ 36255336 (+) True G1690089
TU1933083 lncRNA upstream 14245 36250096 ~ 36250415 (+) True G1690088
TU1933071 lncRNA upstream 16406 36247808 ~ 36248254 (+) True G1690078
TU1932802 lncRNA upstream 68209 36196107 ~ 36196451 (+) True G1689849
TU1933089 lncRNA downstream 903 36265884 ~ 36266118 (+) True G1690093
TU1933090 lncRNA downstream 1583 36266564 ~ 36266865 (+) True G1690094
TU1933091 lncRNA downstream 2524 36267505 ~ 36267705 (+) True G1690095
TU1933094 lncRNA downstream 9907 36274888 ~ 36275127 (+) True G1690098
TU1933102 lncRNA downstream 20152 36285133 ~ 36285372 (+) True G1690106
XM_021576572.2 mRNA upstream 17148 36207378 ~ 36247512 (+) True LOC110499432
XM_021576571.2 mRNA upstream 85059 36173188 ~ 36179601 (+) True mrpl27
XM_021576569.2 mRNA upstream 93761 36161203 ~ 36170899 (+) True LOC110499428
XM_036956274.1 mRNA upstream 106878 36125503 ~ 36157782 (+) False LOC110499426
XM_036956275.1 mRNA upstream 106878 36125746 ~ 36157782 (+) False LOC110499426
XR_005038403.1 mRNA downstream 158765 36423746 ~ 36423861 (+) True LOC118942466
XM_036956294.1 mRNA downstream 172224 36437205 ~ 36540905 (+) True LOC110499434
XM_036956295.1 mRNA downstream 288898 36553879 ~ 36564830 (+) False LOC110499435
XM_036955562.1 mRNA downstream 313745 36578726 ~ 36584090 (+) False LOC118942015
XM_036956296.1 mRNA downstream 430794 36695775 ~ 36809459 (+) False LOC110499541
TU1932658 other upstream 139270 36120616 ~ 36125390 (+) True G1689732
TU1932587 other upstream 382786 35881578 ~ 35881874 (+) True G1689671
TU1932214 other upstream 562521 35701220 ~ 35702139 (+) True LOC118942012
TU1932215 other upstream 582223 35681367 ~ 35682437 (+) True G1689347
TU1932015 other upstream 880094 35381709 ~ 35384566 (+) False LOC110499396
TU1933095 other downstream 10501 36275482 ~ 36275943 (+) True G1690099
TU1933112 other downstream 39958 36304939 ~ 36312698 (+) False G1690116
TU1933113 other downstream 39958 36304939 ~ 36312698 (+) True G1690116
TU1933843 other downstream 613070 36878051 ~ 36880738 (+) True G1690753
TU1934277 other downstream 1276939 37541920 ~ 37543265 (+) True G1691142

Expression Profile