RNA id: TU2381294


Basic Information

Item Value
RNA id TU2381294
length 223
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G2082509
representative False

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 40671690 ~ 40672527 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

GCACGTTGAGTTTCCACACCAATGCAAAGCCTTCATACTGTAACTGAGACGCTTGTTAGCCTtaaacatttcattttttttaactttCTCTTTATTTTACATCTTGTGATGCTGCTGTATGTACATCGCCTTTTTATGTCTGTGTCAGTACTTTTAACAATTTAAAATATTGCCTAAACTCTACCAGCCATTCACTTACATATGGATAtgtttgacttgattt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2381316 lncRNA upstream 31299 40636576 ~ 40640391 (+) True G2082525
TU2381308 lncRNA upstream 48061 40622440 ~ 40623629 (+) True G2082517
TU2381309 lncRNA upstream 51595 40619412 ~ 40620095 (+) True G2082518
TU2381307 lncRNA upstream 53847 40617547 ~ 40617843 (+) True G2082516
TU2381278 lncRNA upstream 75409 40596030 ~ 40596281 (+) True G2082500
TU2381287 lncRNA downstream 160 40672072 ~ 40672527 (+) True G2082509
TU2381352 lncRNA downstream 23696 40695608 ~ 40696534 (+) True G2082554
TU2381405 lncRNA downstream 133561 40805473 ~ 40805922 (+) False G2082604
TU2381406 lncRNA downstream 133708 40805620 ~ 40805922 (+) True G2082604
TU2381411 lncRNA downstream 140183 40812095 ~ 40812351 (+) True G2082609
XM_036965107.1 mRNA upstream 1611 40661246 ~ 40670079 (+) False LOC110508037
XM_036964772.1 mRNA downstream 20491 40692403 ~ 40836419 (+) False LOC110507225
XM_036964769.1 mRNA downstream 20491 40692403 ~ 40840064 (+) False LOC110507225
XM_036964771.1 mRNA downstream 20491 40692403 ~ 40840064 (+) False LOC110507225
XM_036964770.1 mRNA downstream 57103 40729015 ~ 40840064 (+) True LOC110507225
XM_021588488.2 mRNA downstream 168794 40840706 ~ 40847141 (+) False LOC110508042
TU2380828 other upstream 713939 39957215 ~ 39957751 (+) True G2082162
TU2380578 other upstream 737855 39931874 ~ 39933835 (+) True G2081949
TU2380477 other upstream 758612 39895667 ~ 39913078 (+) False LOC110507223
TU2380510 other upstream 834307 39827658 ~ 39837383 (+) True G2081884
TU2378436 other upstream 2726539 37944932 ~ 37945151 (+) True G2080014
TU2381755 other downstream 171602 40843514 ~ 40844780 (+) False LOC110508042
TU2381759 other downstream 172917 40844829 ~ 40846039 (+) False LOC110508042
TU2381889 other downstream 309458 40981370 ~ 40984854 (+) True G2083005
TU2382143 other downstream 540292 41212204 ~ 41212772 (+) True G2083239
TU2382447 other downstream 834447 41506359 ~ 41507173 (+) True LOC110507232

Expression Profile