RNA id: TCONS_00065920


Basic Information

Item Value
RNA id TCONS_00065920
length 2859
RNA type mRNA
GC content 0.48
exon number 11
gene id XLOC_033697
representative False

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 24528414 ~ 24572034 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

CACAGATGCCTGTAGAGCTCCTCCGTTTAGTcgcttttttaaaatgaaacacgAGGGGGTTTGAGCTGACGCATCCGTGCATTTTAGGGTATTTCCGATGGATTGAAATGTGCTGAAGCGAAGACCCGATAAGTTTATACCTGTAGAGCATAGGAGGATTGTGATGCGTTGCTGAAAATGAGGCCAGCTATCAGGATGGAGGAAGCGTCGCACGAGACCTGAAGATCGGTCACGCGCAGGACGCATAACGGGGATTTATAACTTGAGCGAAAGGCGGACCGCTCTTTTTTGACAAACAATCACAGGGACCTTGTAACTGCATTGCAGAAATGTAAACGCTTGGGGTAGATTTCAGACTGCTCGAGATAATGTCCATCTTTATGGACCAAGATGACTTGGACCCGGAGGCTTCGGATTCTCTCATGCACGGAGTTCACGGAGCGCACCGGCCCAGGCCGTCATCTTACCGGGCGCTGCGCAGCGCCGTGTCCAGCCTGGCACGACTAGACGACTTCATCTGCGAGAAGATCGGCTCAGGTTTCTTCTCGGAGGTGTTCAAGGTTCAGCATCGCAGCACAGGGCAGGTGATGGCTCTGAAGATGAACACTATGGCCAGTAACAAAGCCAACATGCTGAAGGAGGTGCAGCTGATGAACCGCCTCAGACACCCCAACATACTCAGGTTTGTGGGAGTGTGTGTTCATGAGGGACACCTACATGCTCTGACAGAGtaCATTAATGGTGGTAATCTGGAGCAGCTGTTGAACAGTGACGTGCTTCTGTCCTGGTCTGTGAGAATAAACCTGAGTCTGGATATTGCCAGAGGACTGCAGTACCTCCACAGCAAAGGCATATTTCACAGAGACCTAACGTCCAAGAATTGTCTGGTACGCTGGGAAAACGGCCACTGCACTGCTGTCGTGGGGGACTTTGGCCTGGCAGAGAAAATCCCTGATCACAGTGAAGAGGCAGAGAAGCAGAGTTTGGCTGTGGTGGGCTCCCCCTACTGGATGGCGCCAGAGGTGCTCCGTGGAGAACGCTATAATGAGAAGgtGGATGTATTTGCTTATGGTATCATTCTGTGTGAGATTATTGGCCGGATACAGGCGGATCCTGACTTCCTCCCACGaacagagGACTTTGGTCTGGATGTGGAGGCCTTTCGGCTGATGGTTGAAGACTGTCCAGCTCATTTCTTCAACCTGGCAGTCGTCTGTTGTGGCATGAGTCCAGACAGTCGACCGTGCTTCTCAGAGGTGGTGGCAGAGCTGGAGAAGAGAGAGAGCGATGAACTGCAGACTGATCATTTGGAGTCTGATGTACAGGATCAAATGTCCACAAGCTCAACACCTCTGAGTCGTGCTCATTCTCTAGACATCGCATCAGACCCTGTTCTCTGCCGCAGCAAGTCTGCAGTCCTGCTCCCTCCATCCCCTATCTTGAACAACACCACCCCCATGCGAGTCAACCCCTTCTCCCAACGGCAAGACCTAAATGGCGGCCGCATCAAACTCTTTGACACTCCCAGCAAATCTGTCATTTCCCTAACATTCACCCTCCCTCCACCCCCAGACCCCAGCAGCCCTGTCCCGCCACGTTCCCACAGACGCACCCAATCGCTGCCCTGCAAACCTCAAGACATCCAATCACTGTACAGCACTGCTGAGAAACGAATGAATCATCAGAGCATTATGGACAGAGATGTAAATATGCTGGAGATTGGAGGGGACAGTGTGTTGACCATGAGCAGTGGAAGTATTGCTGACCTCTCTGGTGTCCTTGACCCGAACACTACAGGTTCAAACCCAGAGCAAGAGGAAAATCTTGAATTGAGAAGTCAGGATGTTCTAGCGGATGACTCCGGTCTCCCGTTGGATCTAGAGGTGTTGTCCCCTAATAAATGGAGGAGCACTGAGGAGCTGATGGACTGCACTAGTTCTCCTGATACACTAGATGGCGCTGTTGATTCAACCAAACAGTTCTCCAATGGCTGGAGCTCACCGGTTTCTAACGGGCCACCCTCTTTACCTCCGTTATTAGACTTGGACAATAACAACAGCACCATCCCTATAAACCGGCCCCTGGGATGGGGAGTCAATAACTCCAATGGTGCCACGACCCCTCTGACGCCCACCGAACAGGACGAGGTTGTATCCTGTCCCGGTTGCTGTTTAGCAGGGATGAGCTTCCCTTCTATTTGCACACGCAGAGCTCGACAAAACCCTTATAAGAACTTGAATGGTGATGCGGCTGGGAAAAGGCTTCTGTGTAAAGCGTTGCCCCCATCACCTACAGAACCCAACATTACGCTTCCCGGCACGCGGACGTAAACAACACCTCCTGAAAAGGAGAGTTCAGAGTCCACACAAGATGtagtgaagaatgttggaaacctgtagcaTTTGACATGCTTTGTAGGAAAAGCAAACGGATGTAAATGGCTAccgtttctaacattcttcaaaatatcctcttttgtgtttaacagaagaatgaaactcataaatatttagaaagatttgagtaaatgaggacagaattttcatttttgagtgagctgtctctttaaaataaatgctactgCTTAATGTGTTTGAACTAAAGTTCATGCTGGAGCTGAAAAAAAGGAAGCTATGTATTATTGTTGACTAGATTTCAAGCCCTAGTCCTCTAAACTTGAACACTCCTATAGGTTTTAATGCCTTCATAATGATGTGTTGCTAATATCTTTTTTTCgttgttatttttacaattatttgaaAGTTTATTGAAAAAACTATGAGAATGGATGGACAAAAATATAgatgtatatgtattatttttattaatgacatTAAATGACATGGACCAAAAAATAAA

Function

GO: NA

KEGG:

id description
ko01001 Protein kinases

Ensembl:

ensembl_id ENSDART00000133022

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00068822 lncRNA upstream 64114 24457029 ~ 24464316 (+) False XLOC_033694
TCONS_00068823 lncRNA upstream 64114 24457179 ~ 24464316 (+) True XLOC_033694
TCONS_00065905 lncRNA upstream 313275 24210071 ~ 24215155 (+) False XLOC_033690
TCONS_00068572 lncRNA upstream 315870 24210451 ~ 24212560 (+) True XLOC_033690
TCONS_00065903 lncRNA upstream 327846 24196542 ~ 24200584 (+) True XLOC_033688
TCONS_00068824 lncRNA downstream 102537 24673993 ~ 24678634 (+) False XLOC_033701
TCONS_00068825 lncRNA downstream 105617 24677073 ~ 24678634 (+) True XLOC_033701
TCONS_00068826 lncRNA downstream 109766 24681222 ~ 24694747 (+) False XLOC_033702
TCONS_00068827 lncRNA downstream 119271 24690727 ~ 24694747 (+) True XLOC_033702
TCONS_00068573 lncRNA downstream 144021 24715477 ~ 24715800 (+) True XLOC_033703
TCONS_00065918 mRNA upstream 1184 24523017 ~ 24527246 (+) True XLOC_033696
TCONS_00065916 mRNA upstream 4687 24520518 ~ 24523743 (+) False XLOC_033696
TCONS_00065917 mRNA upstream 5284 24522308 ~ 24523146 (+) False XLOC_033696
TCONS_00065913 mRNA upstream 19753 24492108 ~ 24508677 (+) False XLOC_033695
TCONS_00065914 mRNA upstream 23012 24494299 ~ 24505418 (+) False XLOC_033695
TCONS_00065922 mRNA downstream 2265 24573721 ~ 24575938 (+) False XLOC_033698
TCONS_00065923 mRNA downstream 2265 24573721 ~ 24582259 (+) False XLOC_033698
TCONS_00065924 mRNA downstream 3368 24574824 ~ 24607165 (+) True XLOC_033698
TCONS_00065925 mRNA downstream 57090 24628546 ~ 24631322 (+) True XLOC_033699
TCONS_00065926 mRNA downstream 73730 24645186 ~ 24673133 (+) False XLOC_033700
TCONS_00065907 other upstream 264691 24263623 ~ 24263739 (+) True XLOC_033692
TCONS_00065899 other upstream 411286 24114876 ~ 24117144 (+) False XLOC_033685
TCONS_00065895 other upstream 451609 24076711 ~ 24076821 (+) True XLOC_033684
TCONS_00065894 other upstream 453455 24074861 ~ 24074975 (+) True XLOC_033683
TCONS_00065893 other upstream 455946 24072381 ~ 24072484 (+) True XLOC_033682
TCONS_00065954 other downstream 471554 25043010 ~ 25043080 (+) True XLOC_033713
TCONS_00065956 other downstream 473726 25045182 ~ 25045246 (+) False XLOC_033712
TCONS_00065957 other downstream 473954 25045410 ~ 25045479 (+) False XLOC_033712
TCONS_00065958 other downstream 474392 25045848 ~ 25045974 (+) False XLOC_033712
TCONS_00065959 other downstream 474683 25046139 ~ 25046208 (+) False XLOC_033712

Expression Profile

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