RNA id: TU94838



Basic Information


Item Value
RNA id TU94838
length 291
lncRNA type inter_gene
GC content 0.61
exon number 1
gene id G70897
representative True

Chromosome Information


Item Value
chromosome id NC_053118.1
NCBI id CM020915.1
chromosome length 43092710
location 5987050 ~ 5987340 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GATGTTGTCGACCTTGGCGTGGCGGGCGAGGATGCCGGGAagtttgtgctggatgtcaCGGACCTTGGCACCGGGGAAGCAGTAGACCTTGGAGGGACCGCTAGGTAAAGGGGGAATGTGGAGGTCCCTTACCATGGAGCTTCCGATGATCAGCGTGGAGGTTGATGAGTCCGAGGGGGGAGAGTCCGCCCTCAATGGGCGCGTCGACTGTGTGGCTGGACCAGGATGAGCTGCGTGGGGACGTGGCAGAGAAGGGAACTCCTCGTCGTTCGTCAGAATGCTGTAGCGGTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU94833 lncRNA downstream 55272 5931239 ~ 5931778 (-) True G70892
TU94831 lncRNA downstream 60293 5926422 ~ 5926757 (-) True G70890
TU94830 lncRNA downstream 77109 5909637 ~ 5909941 (-) True G70889
TU94811 lncRNA downstream 229262 5757548 ~ 5757788 (-) True G70872
TU94809 lncRNA downstream 229643 5757079 ~ 5757407 (-) True G70870
TU94840 lncRNA upstream 13454 6000794 ~ 6001094 (-) True G70899
TU94843 lncRNA upstream 38190 6025530 ~ 6026098 (-) True G70902
TU94847 lncRNA upstream 116867 6104207 ~ 6104422 (-) True G70906
TU94849 lncRNA upstream 117232 6104572 ~ 6104837 (-) True G70908
TU94856 lncRNA upstream 132036 6119376 ~ 6119689 (-) True G70915
XM_039805867.1 mRNA downstream 121223 5800384 ~ 5865827 (-) True LOC120562245
XM_039805858.1 mRNA downstream 169861 5815221 ~ 5817189 (-) True LOC120562243
XM_039805866.1 mRNA downstream 185138 5800384 ~ 5801912 (-) False LOC120562245
XM_039805868.1 mRNA downstream 185146 5800384 ~ 5801904 (-) False LOC120562245
XM_039806020.1 mRNA downstream 722694 5263433 ~ 5264356 (-) True LOC120562331
XM_039805661.1 mRNA upstream 306371 6293711 ~ 6509543 (-) False adgrb1a
XM_039805658.1 mRNA upstream 306371 6293711 ~ 6509543 (-) False adgrb1a
XM_039805650.1 mRNA upstream 306371 6293711 ~ 6509543 (-) False adgrb1a
XM_039805660.1 mRNA upstream 306371 6293711 ~ 6509543 (-) False adgrb1a
XM_039805651.1 mRNA upstream 306371 6293711 ~ 6509543 (-) False adgrb1a
XR_005639715.1 other downstream 169861 5816245 ~ 5817189 (-) False LOC120562243
XR_005639743.1 other downstream 830720 5155932 ~ 5156330 (-) False LOC120562332
XR_005639742.1 other downstream 1541997 4411134 ~ 4445053 (-) False cep76
XR_005639741.1 other downstream 1541997 4411134 ~ 4445053 (-) False cep76
TU94372 other downstream 1909271 4072324 ~ 4077779 (-) False eny2
TU95121 other upstream 1509723 7497063 ~ 7500153 (-) True G71108
XR_005639915.1 other upstream 1588025 7575365 ~ 7609859 (-) False enpp2
TU95317 other upstream 1808833 7796173 ~ 7807092 (-) True G71261
TU95328 other upstream 1919460 7906800 ~ 7909302 (-) True G71269
TU95337 other upstream 2051985 8039325 ~ 8041777 (-) True G71278

Expression Profile