RNA id: TU124419


Basic Information

Item Value
RNA id TU124419
length 924
lncRNA type read_through
GC content 0.50
exon number 3
gene id G92383
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1216957 ~ 1301575 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cacacacacacacacacagacacacacacacagagacacacacacacacacacacacacacacacacacagagagacacacacacacacacacacacacacacacacacacacacacacacacagagagacacacacacacacacacacacacacacacacacagagacacacacacacacagagacacacacacacacacacacacagagacacacacacacagagacacacacacacacacacacacacacacagacacacacacacacagagagacacacacacacacacacacacacacacagagacacacacacacacacacacacacacacacagagacacacacacacacacacacacacacagagaaaacacacacacagagagacacacacacacacacacacacacacacacagacacacacacacacagagacacacacacacacacacaagagacacacacacacacacacacacacacacacacagagacacacacacacacacacacacacacacagagacacacacacacacacacagagacacacacacacacacacacacacagagacacacacacacacacacacacacacacacacagacacacacacacacagagacacacacacaaacacacacagagagacacacacacagacacacacggagagacacacacagacacacacacaagagacacacacaacacacacagacacagaaacacacacacacagagacacacacagagacacacacacacacacacagagacacacacacacacacacacacacacacacagagacacacagagacacacacacacagagacacacacacacagagacacacacagagacacacacagacacacacacacacacagacacacacagagacacaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU124448 lncRNA downstream 17364 1194809 ~ 1199593 (-) True G92409
TU124425 lncRNA downstream 24427 1128680 ~ 1192530 (-) True G92389
TU124418 lncRNA downstream 63820 1144757 ~ 1153137 (-) True G92382
TU124420 lncRNA downstream 73582 1142095 ~ 1143375 (-) True G92384
TU124431 lncRNA downstream 103451 1113151 ~ 1113506 (-) True G92393
TU124465 lncRNA upstream 11856 1313431 ~ 1313715 (-) True G92419
TU124469 lncRNA upstream 23908 1325483 ~ 1331677 (-) True G92422
TU124491 lncRNA upstream 73933 1375508 ~ 1402932 (-) True G92429
TU124494 lncRNA upstream 96472 1398047 ~ 1439248 (-) True G92430
TU124495 lncRNA upstream 96472 1398047 ~ 1439248 (-) False G92430
XM_039812173.1 mRNA downstream 30387 1168821 ~ 1186570 (-) True palm1a
XM_039812174.1 mRNA downstream 30388 1168821 ~ 1186569 (-) False palm1a
XM_039812175.1 mRNA downstream 30388 1168821 ~ 1186569 (-) False palm1a
XM_039811909.1 mRNA downstream 49391 1154148 ~ 1167566 (-) True LOC120565851
XM_039810239.1 mRNA downstream 91063 1124195 ~ 1125894 (-) True LOC120564968
XM_039812007.1 mRNA upstream 88666 1390241 ~ 1395528 (-) True si:ch211-152f22.4
XM_039811214.1 mRNA upstream 120643 1422218 ~ 1428731 (-) False LOC120565407
XM_039811217.1 mRNA upstream 154998 1456573 ~ 1461949 (-) True LOC120565409
XM_039811216.1 mRNA upstream 281813 1583388 ~ 1605965 (-) False si:ch211-1a19.3
XM_039811215.1 mRNA upstream 283175 1584750 ~ 1605966 (-) True si:ch211-1a19.3
TU124422 other downstream 87103 1103192 ~ 1129854 (-) False LOC120565934
TU124370 other downstream 234220 975269 ~ 982737 (-) False LOC120565586
TU124371 other downstream 234220 975295 ~ 982737 (-) False LOC120565586
TU123850 other downstream 532438 683959 ~ 684519 (-) True G92012
TU123830 other downstream 650236 553733 ~ 566721 (-) False LOC120565889
TU124459 other upstream 97403 1398978 ~ 1440293 (-) True G92415
TU124510 other upstream 220916 1522491 ~ 1558418 (-) True G92437
TU124512 other upstream 232086 1533661 ~ 1558418 (-) False G92437
TU124596 other upstream 586787 1888362 ~ 1890705 (-) False G92495
TU124597 other upstream 586787 1888362 ~ 1890705 (-) False G92495

Expression Profile