RNA id: TU124491



Basic Information


Item Value
RNA id TU124491
length 273
lncRNA type sense_over
GC content 0.49
exon number 3
gene id G92429
representative True

Chromosome Information


Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1375508 ~ 1402932 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


actgtatacacacacacacacacacacacacacacacagacacacacagacacacacacacacacagagacactctcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagacagacagacagacagacagacagacagacagacagacagacagacacacacacacacacaaacacacagacagacagacagac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU124469 lncRNA downstream 43831 1325483 ~ 1331677 (-) True G92422
TU124465 lncRNA downstream 61793 1313431 ~ 1313715 (-) True G92419
TU124411 lncRNA downstream 131932 1240209 ~ 1243576 (-) False dbt
TU124484 lncRNA upstream 17708 1420640 ~ 1650064 (-) False LOC120565407
TU124486 lncRNA upstream 17708 1420640 ~ 1425506 (-) True LOC120565407
TU124504 lncRNA upstream 36042 1438974 ~ 1521997 (-) False G92433
TU124460 lncRNA upstream 37125 1440057 ~ 1523081 (-) False G92415
TU124508 lncRNA upstream 68043 1470975 ~ 1471674 (-) True G92435
XM_039811452.1 mRNA downstream 105247 1243546 ~ 1270261 (-) False dbt
XM_039810888.1 mRNA downstream 135459 1229033 ~ 1240049 (-) True lrrc39
XM_039811450.1 mRNA downstream 153090 1189910 ~ 1222418 (-) True map1sa
XM_039812174.1 mRNA downstream 188939 1168821 ~ 1186569 (-) False palm1a
XM_039811214.1 mRNA upstream 19286 1422218 ~ 1428731 (-) False LOC120565407
XM_039811217.1 mRNA upstream 53641 1456573 ~ 1461949 (-) True LOC120565409
XM_039811216.1 mRNA upstream 180456 1583388 ~ 1605965 (-) False si:ch211-1a19.3
XM_039811215.1 mRNA upstream 181818 1584750 ~ 1605966 (-) True si:ch211-1a19.3
XM_039811219.1 mRNA upstream 434605 1837537 ~ 1857991 (-) True LOC120565418
TU124456 other downstream 135490 1236067 ~ 1240018 (-) False lrrc39
TU124422 other downstream 245654 1103192 ~ 1129854 (-) False LOC120565934
TU124370 other downstream 392771 975269 ~ 982737 (-) False LOC120565586
TU124371 other downstream 392771 975295 ~ 982737 (-) False LOC120565586
TU123850 other downstream 690989 683959 ~ 684519 (-) True G92012
TU124510 other upstream 119559 1522491 ~ 1558418 (-) True G92437
TU124512 other upstream 130729 1533661 ~ 1558418 (-) False G92437
TU124596 other upstream 485430 1888362 ~ 1890705 (-) False G92495
TU124597 other upstream 485430 1888362 ~ 1890705 (-) False G92495
TU124601 other upstream 485430 1888362 ~ 1890705 (-) False G92495

Expression Profile