RNA id: XM_039811231.1


Basic Information

Item Value
RNA id XM_039811231.1
length 4471
RNA type mRNA
GC content 0.52
exon number 7
gene id zbtb37
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1916283 ~ 2019954 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTGCCCCGCGCGTTTTCTTCCTTCCCTTCTTCCTTCCTGCAGCCTCGGCCCTTCTGCCGTTAAAAAGGAAGATGAGAAGCCGCGGCAGCAGCCCGCTGACACCGACACCGAACCGGGACCGAGTCTGACTTCCAGCGGAATGGCGGCGGAGTGGCTGCCAACGGACCGACGCCCCGGCGCAGCCGCTGTTTCCCGGCCTTGAACCCGTCGCGAGCGCCGCTGGAGTCCCGGAGCTGCGGAGCctgccgggccgggccgggccgaaCTGAGCCGTGCTGAGCCGTGCTAACCGTATCCCGCCCGCCGTGCTAACGATGCCCAGCTAACGTTATAGCGGCAGGACTGAAGTTAGACAGCACCATACCCTGAAACCAGACCCGATCTCCCGCTGTCCCCCCTTCAGCATGGAGCGCTCCGGCAGCATCCAGCTGGACATCCCCGACTTCAGCAACTCGGTGCTGTCCCACCTGAACCAGCTGCGCGTGCAGGGCCGGCTCTGTGACATCGTGGTCAACGTGCAGGGCCACAGCTTCCGGGCGCACAAAGTGGTGCTGGCGGCCAGCTCCCCGTACTTCCGGGACCACATGTCTCTGGGCCAGATGAGCACGGTGTCCCTGACGGTGATCCGCAGCCCGCCGGTGTTCGAGCAGCTGTTGGGCTTCTGCTACACGGGCCGCCTCTGCCTGCAGCTCGCCGACATCATCAGCTACCTGACCGCCGCCAGCTTCCTGCAGATGCAGCACATCATCGACCGCTGCACGCAGATCCTGGAGGGCATCCACCTGAAGATCAGCCTGGCCGACCTGGAGGCGGAGCCAAGGAACGAGGAGGGGGGGCCGCCGCCAAGGGGAGCCAGCTCGCGGAGCGGCAGGACTCTGGAGGCCGTGGTGCGAGCCGGCGGCCTGCGGCTGCTCGGCGCCCGGGGGTCCACGGAGGCGTGCGAGGCGGTCAGCCCCGCCGAGGAGCCTCTGAGCCCGGCGCCGCTGCCGCTGGAGGGGCCCGGCGCCGCGTCCAGCAGCCGGGGGGGCCGAGAGCCGATCCTGCGCATCAACCGGGCCGGCCAGTGGTACGTGGAGACCAGCGGCGAGCCGGAGACCAGCGGCAGCGCCGAGGACGGCGAGCGGGTCCGGATCAAGAcggagaggatggaggagtgGATCGGAGCGGGGGGGCAccagggggaggagggggggccggaggaggaggaggaggaggggggcacCATGGTGATCGACACGTCGGGACGCAGCACGCTGCTGGCGGCGCCCGGCGGAGCGGCGGCGAGCCGCAGCGCTCAGCCGTCCTCCAGCTTCAGCGAGACGGACCGgtTCAGTCCCAGCGGCAGCGTGGTCGTCCTGTCAGAGCGCCAGAGAGCCAAAAGCGAGTCTCCGAGCCGGGCGGACGACCTGCGGCAGCCAAACTCACaggggGAGGAGCACGCAGCGCTGGATATGGGCGGCTACGAGGACTACCTGCGGGAGCAGGTGGGCGACCGCTGGTTCCGCTACAACCCGCGGCTCACCTGCATCTACTGCTGCAAGTCCTTCAACCAGAAGGGCAGCCTGGACCGCCACATGCGCCTGCACATGGGCATCACGCCGTTCGTCTGCCGCATCTGTGGGAAGAAGTACACGCGCAAAGACCAGCTGGAGTACCACATCAGGAAGCACACGGGCAACAAGCCCTTCCACTGCCACGTCTGTGGGAAGAGCTTCCCCTTCCAGGCCATCCTGAACCAGCACTTCCGTAAGAACCACCCAGGCTGCGCCCCCCAGGAGGCCCACAGCGCGTCCCCCGAGACCACCACCGCCTCCGTCACGTCCCGGGGCGGCCCCAGCGACGACGCCTCGCCCAGCCAGGACGAGCCCGAAGGCAGCGGGGGGGGCCCGTACGGCGAGGGGCCCCAGGCGTCCGTCTCCACCACAGGGCCCGACTGACCCCCGAGGGGCCCCCCCAGACGCCTCGGGGTCTGAACTGAGACGTTTCTGGGCTTTAAACCACATCTACCTTCACTAACCAAACGGACAGATTAAGCTAAAATGAAGAAACGCCACACACTCCAACAACCTCACGCACCTCCGGCCACTTTATGTTACAGATTTCTACTTTTATATTCCAGGTTTTACAGATGTTACAGGTTTTACAGATGTTACAGACAGGGCTGGGTCTAAGAAAATCCATTCTCTGATTCCCATCGGTCTCCGTTTGAATGATccgatagagagagagggactaAAACAGAAGCTCTTGTACCATTTGAAGCTGGCAGTTTTCTTTAaagtttttgtcctttttttccaactttttattttcctttttccatGTTTTAAGCCCTGAGTTGGATCTTTTAATCTAGATGTTGGTATATCTGAAACTAGACGATCTAAGGATCCACGTCAGGATGAACAACGCTCCAAAGTTAGGAGACATGTTGAAGAGGGAGAATACAGAAGCACTCGgtctctttgtgtttttttgacgTGTTTGTGTCCAACAGACGTTGGCCTCGGCGTCTGAACTGAGACGTTTGTCGGCTTTAAACCTTAACTAATCAAACGGATCAGATTCACACTCCAACAACCTCACGCAAATTAGGAGATAATGTGGTGATTTTTGGCGAGCCAgccttttaaagaaaaaaagcaagatGAAAACGGAGGAGAAACCAGCAGGACGTGCAACCCCGATGTTTGgtagaaaacaacagaaaacaaacaaacaatgcaaGTTAATATTTTGGCCGGTAAAGAAATCTGTTTGGTCGGCAAATTTTAACCAACTTGGCCGGTGAGTCAACAGGTTAATGTCAGACCCTGTCTGCAACTAACGTTTAGTTTCATTTAGGGGTGTTAACGCTCATTTAACACAATCAGTTCCATTTAAATCACAGAAGAAAAGatactaaaatatgatttatcttccagacatttaactgaaaacacagtattctttttttagtaaaaagaagaaatataaagacagaatttaaaaaaataagactcATCTTAAAGATGgcaatatgtactgtatatgtttggTCACTCCAACAACCTCATGCACCTCAGCAGACTTTTTTACggtttgtaatttttttatcttttgcgACTGTtggacgtttttgttgcttttcttgtTGGAGAATCTCTTCCATATTCCATAAGTTCTACAGCTGGTATAGTAACTCAAATACATCCCTGATCCAGTGGATCTGAAACAGAGTCGTGCTGTTATGAATCTGAAAGAATGGATACCCAGCCCTGAACAGGTTTTAGGTTCACGTGCAGCAATCAACAGTTTGCCAAACTCCTCAGTGCCAGTTTCAACATTTCAACAGTTTTAATGATTCATATTTGCCTCGAGACAATCCGGAGCGGCTCGgtttctaataataataataattataataataatcctgCGCGCTCTTTAAACGCCACGTGGGCTTTAAAAACATTTGGTTGCACAAAAACGTCAGAGAGAAGAAAACGGCTTTACGGCTGTTAAAGTTCAGTTCTGGTGTGATCAGAGTTTCTCATCTTTTGTGACGTTAAAACtaatttctttcctttttaaatATCGTAGTCCTGATTGCAGAGAGCGTCTTTATGTCTGCAACCAGGGTCCGAAATTAACTCTCGCCAGGCGCCAAATCTCCCGTTTGAGGGTTATTGGCCACATGGTGGGTAAATGTTTTTGCCAAAATAGTTGTTTTTCAGTCTGTATTTTGGGGAAGCTGCAGATAGTTTCTTCTGTTTCTCTGCTATCAGAGCGACagccaggcagacagacagacagacagacaggcaggcaggcaggcagacagacagacagacagacagacagacagacagacagacagacagacaaacactgaACGCCAGCCCCTGTGTCACTTCTGTTTCCTGTTAGCTGGCGTTTAGCTCGGGCTAATAAATTAGGGAAGAATGTGGTGATTTTTGGCGAGCCAGCCagccttttaaaagaaaaaaagcaggaTGAAAACGGAGGATAAACCAGCAGGACTTGCATCCCCGATGTTTggtagaaaacaacaaaaaacaaaccaaatttTGGCCGGTAAAAAAATCTGTTTGGCCGGCGAATTTTAACCAACTCTGCCGGTGAGTCAACATGTTAATGTCTGACCCTGTCTGCAACTAACGTTTAGTTTCATTTAGGGGTGTTTTCATTATGATACAATATAAAGTGTGACACAATACAAGACTATATCGTTAACGCTCCTTTAACTCAATCAGTTCCATTTaaatcacagaaaaaacatactaaaatatgatttatcttccagacatttaactgaaaacacagtattctttttttaataaaaagaataaatataaagaTGGAATTTCAAAAATAAGACTCATCTTAAAGATGgcaatatgtactgtatatgtttggtctctaaaatgtggatcagtgtttcccaaaaagccctcatgatgacgtcctcaaa

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU124528 lncRNA downstream 1860 1898546 ~ 1914423 (-) True G92447
TU124523 lncRNA downstream 3246 1908473 ~ 1913037 (-) True G92445
TU124524 lncRNA downstream 6794 1909238 ~ 1909489 (-) False G92445
TU124609 lncRNA downstream 19236 1896673 ~ 1897047 (-) True G92498
XR_005640240.1 lncRNA downstream 92037 1815893 ~ 1824246 (-) True LOC120565417
TU124622 lncRNA upstream 2399 2022353 ~ 2025713 (-) True G92502
TU124584 lncRNA upstream 7579 2027533 ~ 2048577 (-) True G92488
TU124585 lncRNA upstream 25808 2045762 ~ 2048577 (-) False G92488
TU124651 lncRNA upstream 34605 2054559 ~ 2056284 (-) True G92518
TU124583 lncRNA upstream 39275 2059229 ~ 2071942 (-) True G92487
XM_039811219.1 mRNA downstream 58292 1837537 ~ 1857991 (-) True LOC120565418
XM_039811215.1 mRNA downstream 310317 1584750 ~ 1605966 (-) True si:ch211-1a19.3
XM_039811216.1 mRNA downstream 310318 1583388 ~ 1605965 (-) False si:ch211-1a19.3
XM_039811217.1 mRNA downstream 454334 1456573 ~ 1461949 (-) True LOC120565409
XM_039811214.1 mRNA downstream 487552 1422218 ~ 1428731 (-) False LOC120565407
XM_039811237.1 mRNA upstream 6433 2026387 ~ 2028279 (-) True s1pr1
XM_039811249.1 mRNA upstream 43712 2063666 ~ 2087124 (-) True slc30a7
XM_039811468.1 mRNA upstream 114607 2134561 ~ 2163094 (-) True LOC120565577
XM_039811226.1 mRNA upstream 433365 2453319 ~ 2456640 (-) True LOC120565424
XM_039811227.1 mRNA upstream 433365 2453319 ~ 2456299 (-) False LOC120565424
TU124522 other downstream 3246 1893688 ~ 1913037 (-) False G92445
TU124596 other downstream 25578 1888362 ~ 1890705 (-) False G92495
TU124597 other downstream 25578 1888362 ~ 1890705 (-) False G92495
TU124601 other downstream 25578 1888362 ~ 1890705 (-) False G92495
TU124602 other downstream 25578 1888362 ~ 1890705 (-) False G92495
TU124644 other upstream 7177 2027131 ~ 2031057 (-) False s1pr1
TU124656 other upstream 56888 2076842 ~ 2087097 (-) False slc30a7
TU124674 other upstream 268321 2288275 ~ 2307309 (-) True G92535
TU124728 other upstream 341037 2360991 ~ 2361662 (-) True G92564
TU124734 other upstream 346198 2366152 ~ 2368010 (-) False G92565

Expression Profile