RNA id: TU200496



Basic Information


Item Value
RNA id TU200496
length 241
lncRNA type intronic
GC content 0.44
exon number 2
gene id G148295
representative True

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 31402663 ~ 31403514 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


aaacccaactgtcccgttattctttatctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttcttaacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttttctaaacccatctgtcccgttcttcttttcttgCGTCGGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU200481 lncRNA downstream 24099 31370488 ~ 31378564 (-) False G148286
TU200486 lncRNA downstream 27607 31373546 ~ 31375056 (-) True G148287
TU200482 lncRNA downstream 31107 31368935 ~ 31371556 (-) True G148286
TU200480 lncRNA downstream 32385 31368935 ~ 31370278 (-) False G148286
TU200435 lncRNA downstream 84897 31278297 ~ 31317766 (-) False LOC120572802
TU200502 lncRNA upstream 11235 31414749 ~ 31416827 (-) True G148299
TU200430 lncRNA upstream 25414 31428928 ~ 31580402 (-) True G148246
TU200385 lncRNA upstream 43316 31446830 ~ 31449452 (-) False G148246
TU200525 lncRNA upstream 84050 31487564 ~ 31950363 (-) True G148314
XR_005641606.1 lncRNA upstream 229434 31632948 ~ 31634645 (-) True LOC120573032
XM_039822402.1 mRNA downstream 148424 31245793 ~ 31254239 (-) True LOC120572887
XM_039822291.1 mRNA downstream 179896 31220588 ~ 31222767 (-) True LOC120572825
XM_039822458.1 mRNA downstream 276413 31109431 ~ 31126250 (-) True LOC120572930
XM_039822438.1 mRNA downstream 346278 31046646 ~ 31056385 (-) False LOC120572919
XM_039822162.1 mRNA upstream 32301 31435815 ~ 31623813 (-) False LOC120572747
XM_039822159.1 mRNA upstream 32301 31435815 ~ 31623813 (-) True LOC120572747
XM_039822160.1 mRNA upstream 32301 31435815 ~ 31623813 (-) False LOC120572747
XM_039822161.1 mRNA upstream 32301 31435815 ~ 31623812 (-) False LOC120572747
XM_039822163.1 mRNA upstream 32301 31435815 ~ 31611033 (-) False LOC120572747
TU199667 other downstream 571343 30829970 ~ 30831320 (-) False LOC120572603
TU199644 other downstream 725666 30675187 ~ 30676997 (-) False G147699
XR_005641506.1 other downstream 892637 30503116 ~ 30510026 (-) False LOC120572891
XR_005641505.1 other downstream 892637 30503116 ~ 30510026 (-) True LOC120572891
XR_005641504.1 other downstream 928088 30470495 ~ 30474575 (-) False LOC120572884
TU200398 other upstream 203537 31607051 ~ 31608486 (-) False G148246
TU200397 other upstream 313858 31717372 ~ 31737682 (-) False G148246
TU200566 other upstream 759542 32163056 ~ 32167375 (-) False LOC120572607
TU200650 other upstream 969564 32373078 ~ 32375549 (-) False LOC120572607
TU200707 other upstream 1294807 32698321 ~ 32700405 (-) True G148453

Expression Profile