RNA id: TU201423



Basic Information


Item Value
RNA id TU201423
length 246
lncRNA type read_through
GC content 0.54
exon number 2
gene id G148945
representative True

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 34268529 ~ 34650586 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GAAGTCAGACGACTGCTTGCTGAGTAGCCACATGGTGGCCATTCCCTGAACGGTTGTGTTGACGTCAGGGAATGTCTGCAGCATCGTGGCCTTGCTCGTTTTCCCCTTTGTGGTTGGTGGAGGAAGTTGCAGAGAGATGGGAGTGTTGGGCAGCATCGTGGCCTTGCTTGTTTTCCCCTTTGTGGTTGGTGGAGGAAGTTGCAGAGAGATGGGAGTGTTGGGCATCCAGCCACCATAGTCATACTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU201369 lncRNA downstream 66674 34190239 ~ 34201855 (-) False LOC120572826
TU201365 lncRNA downstream 92682 34082462 ~ 34175847 (-) True LOC120572812
TU201364 lncRNA downstream 92682 34161271 ~ 34175847 (-) False LOC120572812
TU201366 lncRNA downstream 92682 34164725 ~ 34175847 (-) False LOC120572812
TU201374 lncRNA downstream 141456 34124402 ~ 34127073 (-) True G148902
TU201552 lncRNA upstream 73375 34723961 ~ 34731597 (-) True G149044
XR_005641589.1 lncRNA upstream 187450 34838036 ~ 34841517 (-) True LOC120573015
TU201577 lncRNA upstream 187577 34838163 ~ 34842276 (-) False LOC120573015
XR_005641563.1 lncRNA upstream 239611 34890197 ~ 34890807 (-) True LOC120572990
TU201909 lncRNA upstream 513950 35164536 ~ 35165076 (-) True G149311
XM_039822296.1 mRNA downstream 74934 34046820 ~ 34193595 (-) False LOC120572826
XM_039822293.1 mRNA downstream 74937 34046237 ~ 34193592 (-) False LOC120572826
XM_039822267.1 mRNA downstream 93578 34082964 ~ 34174951 (-) False LOC120572812
XM_039822295.1 mRNA downstream 193015 34046237 ~ 34075514 (-) False LOC120572826
XM_039822294.1 mRNA downstream 215615 34046237 ~ 34052914 (-) True LOC120572826
XM_039822235.1 mRNA upstream 27625 34678211 ~ 34767886 (-) False LOC120572793
XM_039822236.1 mRNA upstream 27625 34678211 ~ 34749411 (-) True LOC120572793
XM_039822234.1 mRNA upstream 27625 34678211 ~ 34721968 (-) False LOC120572793
XM_039822238.1 mRNA upstream 27625 34678211 ~ 34721967 (-) False LOC120572793
XM_039822237.1 mRNA upstream 27625 34678211 ~ 34720324 (-) False LOC120572793
XR_005641496.1 other downstream 92484 34165127 ~ 34176045 (-) False LOC120572812
TU201394 other downstream 247450 34020572 ~ 34021079 (-) True G148918
TU201327 other downstream 479154 33788595 ~ 33789375 (-) False G148879
TU201571 other upstream 174062 34824648 ~ 34831378 (-) True G149062
TU201582 other upstream 204522 34855108 ~ 34860914 (-) False LOC120572844
TU201870 other upstream 395339 35045925 ~ 35049559 (-) True G149285
TU201906 other upstream 504496 35155082 ~ 35162119 (-) True G149309
TU201961 other upstream 721184 35371770 ~ 35428656 (-) False G149349

Expression Profile