RNA id: TU203610


Basic Information

Item Value
RNA id TU203610
length 497
lncRNA type intronic
GC content 0.42
exon number 2
gene id G150426
representative False

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 1079059 ~ 1081115 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcctgttcttctttacctaaacccaactgtcccgttcttctttatctaaacccaactgtcccgttattctttatctaaacccaactgtcccgttcttctttatctaaacccaactgtcccgttcttctttatctaaacccaactgtcctgttcttctttacctaaacccaactgtcccgttcttctttatctaaacccaactgtcccgttcttctttacctaaacccaactgtcctgttcttctttacctaaacccaactgtcccgttcttctttacctaaacccaactgtcccgttcttctttaactaaacccaactgtcctgttcttctttatctaaacccaactgtcccgttcttctttatctaaacccaactgtcccgttcttctttatctaaacccaactgtcccgttcttcttc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU203599 lncRNA upstream 20781 1058015 ~ 1059050 (+) True G150419
TU203391 lncRNA upstream 56310 1022049 ~ 1023521 (+) False G150304
TU203393 lncRNA upstream 56310 1022049 ~ 1023521 (+) False G150304
TU203587 lncRNA upstream 67746 1011325 ~ 1012085 (+) True G150415
TU203585 lncRNA upstream 75920 1003604 ~ 1003911 (+) False LOC120574276
TU203616 lncRNA downstream 766 1081881 ~ 1099631 (+) True G150428
TU203567 lncRNA downstream 26982 1108097 ~ 1133185 (+) True G150397
TU203624 lncRNA downstream 41460 1122575 ~ 1153712 (+) True G150433
TU203647 lncRNA downstream 89178 1170293 ~ 1174601 (+) False G150450
TU203648 lncRNA downstream 89178 1170293 ~ 1174601 (+) False G150450
XM_039823697.1 mRNA upstream 17238 1033169 ~ 1062593 (+) True LOC120573835
XM_039824567.1 mRNA upstream 58562 974206 ~ 1021269 (+) True LOC120574276
XM_039823853.1 mRNA upstream 112866 875532 ~ 966965 (+) True LOC120573938
XM_039823851.1 mRNA upstream 205446 787654 ~ 874385 (+) True LOC120573937
XM_039823695.1 mRNA downstream 321867 1402982 ~ 1419898 (+) True LOC120573834
XM_039825098.1 mRNA downstream 404479 1485594 ~ 1498100 (+) True jmjd8
XM_039823747.1 mRNA downstream 686526 1767641 ~ 1775294 (+) True LOC120573865
XM_039823746.1 mRNA downstream 687961 1769076 ~ 1776571 (+) False LOC120573865
XM_039823745.1 mRNA downstream 687961 1769076 ~ 1776569 (+) False LOC120573865
TU203395 other upstream 56310 1022049 ~ 1023521 (+) True G150304
TU203532 other upstream 86609 974246 ~ 993222 (+) False LOC120574276
TU203545 other upstream 212096 846923 ~ 867735 (+) False LOC120573939
XR_005641826.1 other upstream 423067 655607 ~ 656764 (+) False LOC120574137
TU203568 other downstream 54094 1135209 ~ 1220823 (+) True G150398
TU203645 other downstream 89178 1170293 ~ 1175782 (+) True G150450
TU203564 other downstream 134767 1215882 ~ 1216669 (+) True G150394
TU203556 other downstream 170682 1251797 ~ 1254020 (+) False G150388
TU203557 other downstream 170682 1251797 ~ 1254020 (+) False G150388

Expression Profile