RNA id: TU210486



Basic Information


Item Value
RNA id TU210486
length 410
lncRNA type inter_gene
GC content 0.50
exon number 4
gene id G155298
representative True

Chromosome Information


Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 15694773 ~ 15695558 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTTCCCTGATACAATCTTCTCGTAAATCTGAATAGGCTGGTCAGCAAAGAAGGGGGGGTAACCAGCAGCCATCTCATATATCAGCACTCCCAGAGCCCACCAGTCCACTGCTTTATTGTAACCCTTACTGAGGATGATCTCTGGCGCCAGGTACTCTGGGGTCCCGCAAAGCGTCCAGGTTCGGCCCTTCACCCTTTTCGCGAATCCAAAATCTGTTACCTGGATGTAACCTTGCTGGTCGATGAGCAGATTCTCTGGCTTAAGATCTCGGTAAATGAGATCCAGCGAGTGAAGGTATTCAAAGGTCAGTACAATCTGGGCTGCGTAGAAGCGGGCGTGTGGTTCACTGAATCTACCGATTCTCCTTAAGTGTGAGAACATTTCACCGCCGGGTACATACTCCATTATCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU210482 lncRNA downstream 3121 15682369 ~ 15691652 (-) True G155295
TU210397 lncRNA downstream 61937 15551004 ~ 15632836 (-) True G155239
TU210400 lncRNA downstream 139887 15554043 ~ 15554886 (-) True G155242
TU210389 lncRNA downstream 150756 15541557 ~ 15544017 (-) True G155234
TU210385 lncRNA downstream 167168 15526949 ~ 15527605 (-) True G155232
TU210500 lncRNA upstream 33375 15728933 ~ 15774308 (-) True G155307
XR_005641874.1 lncRNA upstream 127433 15822991 ~ 15825654 (-) True LOC120574547
TU210521 lncRNA upstream 128335 15823893 ~ 15825649 (-) False LOC120574547
TU210562 lncRNA upstream 195463 15891021 ~ 15891931 (-) True G155359
TU210686 lncRNA upstream 358432 16053990 ~ 16054756 (-) True G155439
XM_039824926.1 mRNA downstream 21318 15670165 ~ 15673455 (-) False crb3a
XM_039824925.1 mRNA downstream 21318 15670165 ~ 15673455 (-) True crb3a
XM_039824836.1 mRNA downstream 30176 15662274 ~ 15664597 (-) True LOC120574497
XM_039825322.1 mRNA downstream 49151 15605503 ~ 15645622 (-) False gcgra
XM_039824905.1 mRNA upstream 22289 15717847 ~ 15724422 (-) True tecra
XM_039824914.1 mRNA upstream 46205 15741763 ~ 15745572 (-) True LOC120574537
XM_039824851.1 mRNA upstream 51233 15746791 ~ 15788515 (-) False LOC120574502
XM_039824850.1 mRNA upstream 51233 15746791 ~ 15788515 (-) True LOC120574502
XM_039824895.1 mRNA upstream 94493 15790051 ~ 15796449 (-) True qtrt1
unassigned_transcript_854 other downstream 130569 15564133 ~ 15564204 (-) True trnae-cuc_25
TU210305 other downstream 245270 15443164 ~ 15449503 (-) False metrnla
unassigned_transcript_853 other downstream 684433 15009798 ~ 15010340 (-) True LOC120573850
unassigned_transcript_852 other downstream 694629 14998773 ~ 15000144 (-) True LOC120574429
TU210041 other downstream 837216 14851939 ~ 14857557 (-) True LOC120575102
XR_005641871.1 other upstream 22289 15717847 ~ 15724422 (-) False tecra
TU210508 other upstream 48117 15743675 ~ 15744117 (-) False LOC120574537
TU210507 other upstream 51759 15747317 ~ 15749430 (-) False LOC120574502
TU210517 other upstream 117500 15813058 ~ 15815369 (-) True G155323
XR_005641873.1 other upstream 458229 16153787 ~ 16156067 (-) False LOC120574545

Expression Profile