RNA id: unassigned_transcript_765


Basic Information

Item Value
RNA id unassigned_transcript_765
length 430
RNA type V_gene_segment
GC content 0.48
exon number 2
gene id LOC120574659
representative True

Chromosome Information

Item Value
chromosome id NC_053126.1
NCBI id CM020923.1
chromosome length 38831509
location 9424509 ~ 9425046 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

aggacaggactgctgctgttaactctctgctgggcagGTGTTTGCAGTCAGACTCTGACTGAGTCTGAACCAGTGGTAAAGCGCCCTGGAGAATCCCACAAACTGACCTGTACATATGCAGGAATATCAGATGACGATGCTTATATCAGCTGGATCAGACAAGCTGAaggaaaaggactggagtgggttGCCTACATTTCTGCTCCAAGTGGAAGCACTAAAACTTATTCAACGTCAGTCCAGAATCGCTTCACCATATCCAGAGACAACAACGTGGACCAggtgtatctgcagatgaacagcctGACGACTGAAGactctgctgtttattattgtgctcgagaGCCACAGTGATACAGGAAGCCACAGAGCTGTACACAAACCACTGCAGATGTCACTGTGACAGTCACTGGTAGAAAGTGCTAGTTTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU207976 lncRNA downstream 64659 9359528 ~ 9359850 (-) True G153527
TU207935 lncRNA downstream 86643 9246355 ~ 9337866 (-) False LOC120574352
TU207951 lncRNA downstream 121162 9248397 ~ 9303347 (-) True G153508
TU207940 lncRNA downstream 151395 9249829 ~ 9273114 (-) False LOC120574652
TU207952 lncRNA downstream 159142 9258210 ~ 9265367 (-) True G153509
TU207998 lncRNA upstream 117072 9542118 ~ 9548305 (-) True G153539
TU207921 lncRNA upstream 177811 9602857 ~ 9603106 (-) True G153481
TU208072 lncRNA upstream 327213 9752259 ~ 9798267 (-) True G153588
TU208076 lncRNA upstream 354243 9779289 ~ 9782563 (-) True G153591
TU208095 lncRNA upstream 369046 9794092 ~ 9842982 (-) True G153597
XM_039824655.1 mRNA downstream 17705 9391565 ~ 9406804 (-) True LOC120574368
XM_039824654.1 mRNA downstream 79337 9343701 ~ 9345172 (-) True LOC120574364
XM_039825003.1 mRNA downstream 376386 9043413 ~ 9048123 (-) True cabp5b
XM_039825617.1 mRNA downstream 387681 9020086 ~ 9036828 (-) False sez6l2
XM_039825001.1 mRNA upstream 272597 9697643 ~ 9739305 (-) True LOC120574579
XM_039824129.1 mRNA upstream 636240 10061286 ~ 10149481 (-) False cacna1aa
XM_039824126.1 mRNA upstream 636240 10061286 ~ 10149481 (-) False cacna1aa
XM_039824122.1 mRNA upstream 636240 10061286 ~ 10149481 (-) False cacna1aa
XM_039824120.1 mRNA upstream 636240 10061286 ~ 10149481 (-) False cacna1aa
unassigned_transcript_764 other downstream 3811 9420152 ~ 9420698 (-) True LOC120574660
unassigned_transcript_763 other downstream 16027 9407854 ~ 9408482 (-) True LOC120574369
TU207939 other downstream 28582 9395424 ~ 9395927 (-) True G153499
unassigned_transcript_762 other downstream 35504 9387327 ~ 9389005 (-) True LOC120574367
unassigned_transcript_761 other downstream 47472 9376433 ~ 9377037 (-) True LOC120574366
TU207913 other upstream 3137 9428183 ~ 9433001 (-) True G153473
unassigned_transcript_766 other upstream 10246 9435292 ~ 9436866 (-) True LOC120574373
TU207910 other upstream 13928 9438974 ~ 9439493 (-) True LOC120574374
unassigned_transcript_767 other upstream 13950 9438996 ~ 9439447 (-) False LOC120574374
unassigned_transcript_768 other upstream 15518 9440564 ~ 9441100 (-) True LOC120574375

Expression Profile