RNA id: TU230881



Basic Information


Item Value
RNA id TU230881
length 727
RNA type TUCP
GC content 0.45
exon number 6
gene id micu2
representative False

Chromosome Information


Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 31602514 ~ 31611713 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGAAGCCTTTTTACAACTAGCTtcctaaaaaaagaaatggccaGCTGGGGAAGGGTCGCCGCCGTGTTGAGGAATGTTTTGGGGAGTCCTCGGTCTCTGAAAACGTTATCACTGCGCCGTGCTGTCGGACCTGGTATTTTAGGGTCTGTTATCGGAGCTGGGGTTATCTGTTACTACCAGTATCATGCCAACAACAGGACTCTGCCCTTCGCCGTTCATGCTGAGGTACCAGAAGAGGCTCCAGCACCCCGACTGTCTGCCAGGAAGATGCGGTTCATCCAGTTCGCTTCCGCGGTCTATGAACAGGAGCCGTACATGACCCCGCGAGACTTCCTGTTCTCTGTGATGCTGGAAAATGTTGACCGAAAGCTGCAGAAGAGAATTTTAACAACAAAAGAAGTGAACAAAATGTTGGTGGCTGCCTCTAAAGCCCAGGCTGGTAGTGAGCTGTTCAGAACCATAGGCGACAATGGTTTGATATCCTACACAGAGTATCTGTTCCTGCTGATAGCTATTACcagtaaaaaattttttttttttttttTGCAGTGTTCTGGCCTTTGTGCTCAATCAAGTCATGGATTTTATATTCAGAATGGCAGATCACTTTTAAATTACTTTAGCACTTTTGCTCACAGTGTGTTTAGAAAGCTGGTATATGCTAATTCAGTGGATATTGATGCATTTTCAAGGGCTGGTGTGGggttttcatgttttttgtcaaaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU230864 lncRNA upstream 67198 31531669 ~ 31535329 (+) True G170248
TU230822 lncRNA upstream 180862 31421308 ~ 31421665 (+) True G170214
TU230774 lncRNA upstream 276306 31325993 ~ 31326221 (+) True G170173
TU230748 lncRNA upstream 457392 31144879 ~ 31145135 (+) True G170155
TU230745 lncRNA upstream 458443 31143802 ~ 31144084 (+) True G170152
TU230886 lncRNA downstream 6773 31618457 ~ 31689108 (+) True G170266
TU230893 lncRNA downstream 19860 31631544 ~ 31633040 (+) True G170271
TU230904 lncRNA downstream 59506 31671190 ~ 31674136 (+) True G170282
TU230915 lncRNA downstream 90061 31701745 ~ 31703841 (+) True G170291
TU230917 lncRNA downstream 101603 31713287 ~ 31714253 (+) True G170293
XM_039777922.1 mRNA upstream 5434 31552788 ~ 31597093 (+) True sptbn4a
XM_039777923.1 mRNA upstream 5434 31553493 ~ 31597093 (+) False sptbn4a
XM_039777833.1 mRNA upstream 93111 31480312 ~ 31509416 (+) False LOC120544216
XM_039777837.1 mRNA upstream 93111 31480312 ~ 31509416 (+) False LOC120544216
XM_039777836.1 mRNA upstream 93111 31480312 ~ 31509416 (+) False LOC120544216
XM_039777068.1 mRNA downstream 84448 31696132 ~ 31701593 (+) True ckma
XM_039778348.1 mRNA downstream 290305 31901989 ~ 31906441 (+) True crx
XM_039777471.1 mRNA downstream 635244 32246928 ~ 32394076 (+) True igsf9bb
XM_039777466.1 mRNA downstream 635244 32246928 ~ 32394076 (+) False igsf9bb
XM_039777469.1 mRNA downstream 635244 32246928 ~ 32394076 (+) False igsf9bb
XR_005636475.1 other upstream 93134 31480312 ~ 31509393 (+) True LOC120544216
TU230749 other upstream 384243 31185937 ~ 31218284 (+) True G170156
TU230294 other upstream 1473595 30128532 ~ 30128932 (+) True G169814
XR_005636422.1 other upstream 1490316 30011334 ~ 30112211 (+) False uvrag
TU230254 other upstream 1631420 29945874 ~ 29971107 (+) True G169789
TU230907 other downstream 66314 31677998 ~ 31680066 (+) True G170284
unassigned_transcript_952 other downstream 191147 31802831 ~ 31802912 (+) True trnas-gcu_8
unassigned_transcript_953 other downstream 193418 31805102 ~ 31805183 (+) True trnas-gcu_9
unassigned_transcript_954 other downstream 193958 31805642 ~ 31805723 (+) True trnas-gcu_10
unassigned_transcript_955 other downstream 195331 31807015 ~ 31807096 (+) True trnas-gcu_11

Expression Profile