RNA id: XM_039777542.1


Basic Information

Item Value
RNA id XM_039777542.1
length 9713
RNA type mRNA
GC content 0.43
exon number 3
gene id si:ch211-284e13.4
representative True

Chromosome Information

Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 23385395 ~ 23400485 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TGGAGGGTATAGACTGTAGGCAACCTCAGACAGGTGGAGGAGACGTCCTCAAGCATCTGAACTGCACCGTGGTTGGAGCTGATCAGGCAGGACTGGGCTGGGCTCTGGCTGGGCTGCAGGACTTGCAGAGGTGGCGGCTGTGCACGCTCGGTGCGCGGATCCTCCTGCAGCTGCTGGATTCACAGTATGATACCAGATCCAAAACATGGTTTGGCTGATTTTCCCATCATGAGCCTTTGCAGACATGCTGGAAACTCAAATGTGGACTCGGGGAGGACGAAGGATGTAGTTGCAATGGATTAATGATGTGTACACATGGGCTTCGATTTTTTTCCTGAGATTATTGGCTTCTAATATTTATCAGCCTGTCTTGGCCATGGAGAACCAAGCAGCCGAGCCGCAGAACTATGAAGATGTGCAGAAAAGCGGCTATCTCCGCAAGCATAAATCAATGCACCGGCGATTCTTCGTGCTGAGGGCGGCCTCGGAGCATGGTCCTGCTCGACTTGAGTATTATGAGAATGAGAAGAAATTCCGCAGTAAATCACCTGTGCCCAAAAAAGTCCTGAACCTGGAGACTTGCTTCAACATCAACAAGCGGGCAGATTCCAAGAACAAGCACATGATAGTCCTTTATTCCCGCAGCGAGAGCTTTGCCATCGCCGCAGACAGCGAGGAGGTCCAAAATGAGTGGTACCAAGCAATGCTGGACCTCCAGTGCAACTGTAAAACTCCTGAAGACTATGGCAGTAGTGGAGAGTGTAGCTCTCCATCTCCTGTTCCAACCTTCAAGGAAGTATGGCAGGTCAAGGTTTGGCCTAAAGGTCTTGGACATGCCAGGAACTTAGTGGGCATTTACCGGCTGTGCCTAACTGACAAGACGGTCAACTTTGTCAAACTCAACTCTGATGTGGCAGCTGTGGTGTTGCAGCTGATGAATGTTCGCAGGTGTGGCCATTCAGAGAATTTTTTCTTCATTGAGGTGGGTCGCTCAGCGATTACCGGCCCTGGAGAGTTCTGGATGCAGGTGGATGACTCTGTGGTGGCTCAGCACATGCACGAGACCCTGCTGGAGGCCATGAAGGCCCTAAGTGAGGAGTTCCGTCAGCGCAGTAAATCTCAGTCTGTGGGGACGTCGTGTGGAGGTGGTACTGCTTCAAACCCCATCAGTGTACCGAGCCGTCGGCATCATCCGAATCTGCCACCAAGCCAGGTGGGCTTCTCCAGACGAGCCCGCACAGAGACCCCTGGAACAGGAGGCAGCAGCACGAGCACTTCACCTACTTCACGCCACGGATTTCCGAGGGCACGGACTGCCAGCATCGGGGCCAGGTCGGAGGAGGGCGGAGCAAGTGCCAAAGGAACATGGGCCAGCTCCAGCCCAAGTCTTAATGGTTCCTGTTCAACTACGCCGACACTGAGGCCCAAGCCCACCAGGGCCCCAACTCCTGCTAAGATTACCCTCAGCCTTGCACGTTACACGCCTAACCCTGCTCCCTCTCCGGCGCCGAGtctctcctccagctctggTCATGGCTCAGAGTGTGGCCTAGTGGGAGCAGCAGTGGGAGGCATGATGATCTGCTCCTACCCTCGCGTTTCTCAGAGAGTTTCTGTTTCAGGTTCACCGAGCGACTACGGCTCCTCAGATGAATATGGCTCCAGTCCTGGGGAACACTCTCTGCTCGTACCCAATCTGTCTGGACATCACGGAGAAGGCTCCTCCAGTTATATAGTGATGGGACAGCGAGAGGGTCTCCTTGGTTCCCATCATCGCTCAAAAGGCCGACGGATTTTGCGGCGCTCATCCAGTAGGGAATCTGAGGCAGAGCGCAGACTACTAAGTAAGAGGGCTTCCCTGCCTTTGGCTGCCCATGAACGACTGACCACACATAGAAAAGATGaagatgatgaggatgatgaagaATATGCCATCATGTCGCAGAGTGCTAACCGAGAGAGAGCTGATTTGCACCATGGCTCAGGGGTGTTGGCAGTTGGAGGTGGGGATCTTGATGCAGTAGGGAAAAATATGAAGAGGGCTGACAAAAGCAGGCGAGGAGTGGAAGGTGGAGCAGCCGTGGATAGTGGCTATATGTCAATGTTGCCTGGAGTCACGTCTCCTCctgtttcactctctctctcgatAGGTATGTCTGACACCAGTAATAAACCTGGGGCAGATGATGAGTATATGGCCATGACCCCCAACAACAGTGTCTCCCCCCCTCAGCACATCGGCCAGCCCAGCACAGAGGGCTACATGGTCATGTCTCCCAATAGCAGCAGCTCCACAGACCTGCACGGATTGGGCATGTGGGATAGCAGGGCCAGCATGGAGGGCCGGGCTGCAAGTGATTACATGAATATCTCACCTGTCTGCAGCCGCTCTGCCTGCAGCACACCGCCTTCCCACCCCGAACAGCACCAACTGCAACCAAAAATGTTCAATTCCTACTTCTCCCTGCCACGAGCTTATCAACATACTCTCTACACTCGCTTTGAGGAGGACCTAAACAAAGGGGAAGGAAAAAAGGACGGCAGTAGGCATGATAGCGCTGGAAGAGAGGGGGGAGTGGGATACAGCAAGAGAAACAAAATTGCAGCGGGCTCTGCAGGAGGCTGTCAACTCTCCatgtcttcctcttccttctcctccagCTCAGCCAGCAGTGAGAGCCTGGAAGACAAGTTTATATCTGCAGGGAAAGGGTTAAGTGTAGTAAGAACTGGAGCAGAGTACAAGTTTGCGGGAACACAAAAAGATGGGCGTCATCATCAAAAACGTGGATCAAGTAGTAAGAGCCCAAAGCAACAAAGGAGGGGTGTGTCTTCAGACATCACTAAAGCAAACACCTTGCCCAGGGTGAAGGAGAATCTGCTGTCATCAGTATCTCAAAACGTTGATGAGTATGTCAGCATTGTGTTCAATGAGGACAATAAGTATGGCGGAGGGCGACGTTCTGGGTCTGAACGTGGACAACCTGTGATCCATGGAACCCTCCGGCCTTTGAATCAACCACTTCTCTGCCATGATAATCCTGTTAATCTTCCCCGCAGCTTCTCTGCTCCGTTGTCCACCTCCGCCGAATACGTCACCATGGATTTAAGGAAATCCTCATCGCCCCTGACTCCTGTTAGATCCACATTCAGCGCTCCAAAGGGCCCACCAGCTGTTGCCCCCAAGGCCCGACATGAACACAGCACGTCCTCTTCTCTGGCAGCAGAGGGCAATGCCGGGTACAGAACAAAAGCAAAGATGGCAGCAATGCCAACAGATGCCCCTACTCCATTTATTGACATCAAAGGTTCAGATCCCAGCATTTCAGCGAGACCTGCCATCCACTCTGGTCAACCCTCATCCATTGATCAGGAGACAGGCTTGGGTTTTTCCCCTGTCAAGTCCTTCCATTCTCCTGAGCGGAGCAGCAGATCGGTCCGAGGTGACCCCCAGGGACGGCAGAGCCACCGTTCAGAGACTTTTAACTCACCTCCCTCCCTACCACGCCACCCACCCTCTTCTACCTCCATCTTCCCAGAGGGCAGCCAGGCGGCGAGCCATCGGCATGGTTTGGATTGCTCACTGTGGGAGAACAGGCAGGCAGCTAGTTTATCTGCCACACCTCCACCACAAGCCTCAACCTCATCTGCTGAACAAGGCCTTAACTATATTGACCTGGACCTGGCCATTAAGGAGAGCCCTCAAGCCGGAGTGGAGCGTACCTCTGCTGCCTACAACATCGGCGGAAGCGCTATGGGCTGCAGTGCTGGCTCCGGCCTCAACACTTATGCCAGTATTGATTTCTATAAGTCAGAAGAACTGAGAGCACACCAGAACAGTAGAAAGGATGGTCAAGATTGTTGAGCTTCATCTTGGATCTGAGCATGATGCCAATGTGACGGCTCCAAACTCTGTCTGTGAGTGGCCCAATCTGTTGCCACAACTTAACTGTACACTGGAGTCTGAACACTGAAAAACAAACTCATCCCCATCCCGTCGGCTGTATCTGTCAACCAAATGtgtgccaaacacacacacacacacacacacacacacacacacacactcacaaggtAAGGGAAAGGTTTTGTTTATGCCTCGTTTTGAACATAAATGAAATTTGATCATCATTTAACATAATATAGATAAAGGATGACAATTTGATATGTGGCGTGTGTGACTTCTCAGGTGGCCATTATGGCAAAAAAGTCCATCTGTGCATcttaatttaaaacacattgtGATTGGTACATGGGCCAATCTATTGAAGTCTTGTAAATCAAGGCTTTAAGTGGCAGCTGACTCGATCTCAGCTGCATTCTGGAGTGTTTATTTTTTGGGTCCCAAACTTGAATGCTgaaggttttagttttaatatatattatccTTTGTCCATATGTAATAAGTTGAATGATCATCAGGTGTCATTTTGACCCAAAATGGAAGGAAATGCAGATCGGCAGTGGTTTCATACACTCATATATGCTGTCACTGTaaacatatttaatttattatatacAGTTGCTAAAAAAAAGCCTATATACTTGTTGACCACTTTTCTTGTGTCACTGACGGACTTCAAAATGTGCTTAATTTCTGAGGTTTAACAGTTTATGGAATTGGCAAAGAAAgaaagtgttttatataaattaaatttagaTATATTTGTGTATTCAGTCAGTTTTTCTCACAAGAAGAAAATGATTGTGTGAGAATCCCACACATCTTATGCAATCTTTATGAAATTCCGAAGAGTGTAAAAGTGTATTAAATAGGATATCATAATATTGCAATTTCATTTTCACACTGCAGACATCACACTGTTGTACTTGTGCTAGGAGTTTATCTTTAGGTTGTAGTTGAGGGATGAGGTcaatggtttttgttttttttatcctttcaaAATGTTCCGACACAGAACTAAGTTTTATCCCTAAAGCTTTAgatgcacactcacacaggaTGCATGTTTATACAGCTTCAGCTTTGATTACGCACAAACCAAACAGGTCCTCTGACGTCCTGTGGCTGATTCGCAAATGGTGCCAGTATGAAAGTCTAATCCATGCATCTCCATGGTATTTTAGGATATTTGGTGCATTCATTTCTATGGTTTAGTTATTTTATAGTTATTTATTAAGTGACCGTATTTACATATACACTAACAGTTCAAATCTTCAGTAACTGCATTtaccaaaacaaagaagatCCACATAATTGGACTCTTGTGCGCTGTATTTGTATTGCAGCTCAATTGCTGCAGGACATATCACAACATGATTGATGTCACATATATCCTGTATAAAAGCAGGTGCATAAACAATGCATTTATTCAATAACCACAGTATGCAACATTGCATAAAATGGCCAAATTAACAAATATTCTTCTGCTatgcatgtaaacagcttaatTAAATTGGCTTTGAACAGGCAGTAAGACCAATAATTaggttgtatgtatgtaaatgtcCTCACTGAGATGTGCTGAGGGGACCTGATAACAAACTTGTTAGCGAGGGAAACTGAATACTAcggttttgaaaacatttttaacagcTAAGGGACTGTATGCAAATGATTGGGGTGGGGAGAGGGGGCTGAAtcttattttaaattttatgaAAAGCAAAATCCCAATGCCcacaaaataatatatttttggtAAACATATCCTAccctctttgtttttttaacacagaACTGCTAGGTCAACGGAAGCTCTCTGGTTTGTTGGACTTCAGCACATTTCCCCCACATTTCTGATAACAATATATCAGATGAGGCTGACGGATGACTGTAACACCCAATCAATTTCAGGATGCCTGAATCACATGGCCGGGCATGTTGGAGACAGATGTTACAAAGAGTGCAGCATTCAATATGATAATGAAAGCCATCTGTGTGATGTaacttttatatttaaaaaaaaaatacaataaatctcACAGGGGGAGAATGAATCTGGGATgagaaaaggtttaaaaaaaaaacgctcccctgccctcccaaaaaaaagaaaagaaaaaaaaaacataaccctCCCCCTTCTCTGATCGCCTCTAGGCCTATACCACCCTAAAAATTGTCATACAGTCCCTAACTACAGCCCACAAATGAAGTCGTCAATATTTTTCTCTATTTGAATTTTAAAACCTCACAccaatgtataaatgacaatgTTCTAGCACTTTGAGTTGTTTCTGAccaataacatttattttttaattcttaTTTAATGCATTTTGAACCATCGTGTAGCACAAAAgcgtaaaaaaaagtcaaagtgtatatgcttttttttgcaACTGAGCTTTTTTATTATAACTGTATATTATACTTTAGTATAAACTACAGTATACAAGTAGAATGACAGAAACTATAGTATGCAGTCTGttctcctcatttgcataacaGTTAACACAATTCTAATATAAAGTGACACATTACAATGgtatataaaatatacagtatacatataaTGATTAATACTATATAGCCTAGATATCTATATACTCTTTTATAAAGTGCCTCATTTTTGATTGTAGCTGTTTTTACACAGGTAATCTGAAAATGGGTTGTGAAAATAGGGAAAGAGTGTTGTTTCCCTCCTGAGTCCAAATTGTAAATATGTTGAACTTTACAGAAGACAGACAAGACACTTATATTGCTATCAGTCAGCCATAATCAAATTGCCTTACTGTGTTTAtcagaaacatgaaaaaaaaaacttgttttatttttttgcagtgcCTAACACTTCAACACTTCAGCCACAATGTAAGCACTCCCTCGCTCTTTTGTTTCGTCAAGCTGAGGTTtggccaaaaaaaagaagaaaaataccaTATTTTCTCTCCATAGTTTCACACCCTGGGACGCATCCACTTCAGGCCCtactttctttgtttttatttactccTGTCCACTACCAACCAAGCATCCACTTGTTCAGGGTAAAAGCTGACGGCCTGTTGCAGATGGAACATCCTCCATCTGAAGGTGATTGTTAGCGGACACTGCAACAGAAAGCTTGCAGAATACATCTTGTACATGAGGATTCTACATTGTATAgattttattgtaaaatcatTTTTTAATGCCTTTCCCTGTttttacagaaagaaaaaatgaattGAAGTTGAAGTTGCCAGTGTCTTGTATATAAAATAAGTTGACCATTGATAAAACAGGTTCTTACTTAGACAGAACTTGAACTATGTGCTCTAATTTACTTGCAGTATATTTTGAACCCCAAAACAATCATAGAAAGAGGTGATTTTAACTCCTCACAGCAGCCTGGACTAGTGTCTAACTGCTTATCTGGGCTAAAACAGTATTAACACGCTTATGTATTGCTCGTATTATCTGGATGTGGATTCAGTTCCCAGAAGGTGTGAATATTgctacttctctctctctctttttatctcTCTACATTCAAACATGGGACTTGGTCGAAACTATGAGACAGTGCCATTCCTGCTCACGCCTCATTACTTTCTCATTTATTCCATTCTGCTGCTGTCAAACATATTGCCAAAAAGTCTGTCAACAATTCAAAGGTCTACCATAAAGATCATTTTCAAAGAGTAGACACACAAAATCAGTCATCgagctgatttaaaaaaacaaacaacaacaaaactttCACTTGGACAGCCAcagggccaaaaaaaaaaaaaagttaagtgTTTTTCTTAAGGTAGTGTGTCTTATAGTTCATGACTGGTTGCGTACTGTATCCAGAGCTGCTGGTGGAGAGTTTGGCCATGTTGTGACATTAGTGATACTGTATATTGAATCAGGACGTGTTGATATAGAACAAAATTGTCTACTGGATATGGTGTTGCAATGCCAAACACTTCACTAATTGCAGTGACCAAACCCTTCCATTCCAGGGCTCTGGCTGTGTGTATACAGGGTACAAATGAAGAAGGCTTTCTTGATGTATTTTTGACTCTGGAGCTTTTCCCACATTTAGATTGAGTTTTTAGTTCACTAACCAAATATTTCTGACCCTGTGGCAGATATGAAATGCTTCACTGCACTTGCACGCTGATACACATACAAAACAAttggagtgttttaatcctGGAGGTAAAAAGGTTTAGATATTTACTCTGATTCAGCCCTCAACTCACATCAGAGTGTCCTTTCTGATGTGAGTTGAGGGCTGAATCAAGTGCCTGGTTGTGATTACTGGTGTCTGGTCATTAACCAGTTATGTTTGAGTTATCTCGGTGCATAGATAGAAATTCAAACCAGCTCCTGGAAAACCAAGTCTTCCACACATTTCTATGATATTCAATTTGAGATGTGCGCAACACCTATCCCTCATTTCCTTTGCAAAGGACGTGTTTCTGGTGCCAACGTTTTATGTGTATGGTGATCTCTGAGCTTCACACTTGAGATCCGTGACACCAAACTAATACAAAGTTTAATTTGGTTTTTACAAATTCTTCAGGCACTTATCAGTCACTGTTTTTAATCctatgaagtaaaaaaaaaaagtatgttgaTTGAGCACAGCCTACTACTGCCAACAGTTTATGCTCAATACTGACAACTTTATTGCCAAACTCTTGTATAACAAATCCAACTACATGGACTAGTTCCACTTTTATAACTTGTGTTACTTTTTTGTTGAAGTGATCTTTTATAATCTCTTTGTTATTCCTTCAGTGTAACTCTTTTAATTGGGGATTAGTGAGATTCTCTGACTGTACCTCATAATCTCAATTTCGAACAGACGTTAACAGTTGGTAGTAAAGCACCTTGGAGAGTCTGAGAAGGGTTCAGGATATTACTGACGTAGGAGGAAGGCACGAAAAAAAGCTGTGGCTTTGGGTAAATATCAATATGTTTTGTATTCAAAACTACTTTAACAGCGTGAGGCTCTCTGCAGTGTTTCCATTCTCATGACATTGGCGGTCGTATGGAAAATGCTTCTCATCTACGAATCATCAGAATTCTGCCAAGTGTTTTGATTTAATGAAATGCAGAGACTTGTGTTATCTCTTCAGAACATTTTGTGACAACATGTTGAAAACAAGGCAGATGAATTGCTCATCAGACTCTAACTGTGGGAAATGATACTGTATGTACAATCAGGATAGCGATTATAATTACAATGGAAAgagcattgtatgtattttaaagCTAATGATACTACTTGATAATTATGTAAAATGCAAAAAGACTGAACAGGAACTATAGGTATGtaaaatatactgtagtgtGTATAGAGGAGTTTTGCTTGTTAATGGCGAAATTGTTTAAAACAGAATATTGATGATTCTTGTCTGTGATGTAGACAAcgtcaatgttgtttttttttgataaAAGGCAAAGTGATAAGAAATTGgaaaattgtgtgtgtttaatgactGCATGTCTGTTGAACATAAAAGTCTACATTGATGATGTTTTGCAACATGTAGTCAAGTGAGTCTAGACTGTTGTAAGCCATTGAGTTTTTAAGGATAAGCCTGTGGACAGAGGGCACATGTATCTAATCCCAGGCTACTCTGTTTAAACAGATGGTATTTTGTTTAAGTTCAGAGGTGAATACCAACAAAGTGATGTTGTTTGACTAgcatatttttccatgaaaTCACCAAGAGAATAACTTGCTACTGCCCATTAATAAGTCATTGCAATTAATAGTAATGCATCAAAATGTAAGGGAATAAATTCTGATTTCCTACACTTC

Function

GO: NA

KEGG:

id description
K16172 IRS1; insulin receptor substrate 1

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU227795 lncRNA downstream 60058 23323498 ~ 23325337 (-) True G168041
XR_005636546.1 lncRNA downstream 151078 23164507 ~ 23234317 (-) True LOC120544733
TU227723 lncRNA downstream 203923 23181118 ~ 23181472 (-) True G167987
XR_005636364.1 lncRNA downstream 231986 23151348 ~ 23153409 (-) False LOC120543557
TU227703 lncRNA downstream 235990 23148941 ~ 23149405 (-) True G167970
TU227916 lncRNA upstream 26303 23426788 ~ 23427139 (-) False slc12a9
TU227917 lncRNA upstream 27072 23427557 ~ 23428061 (-) False slc12a9
TU227913 lncRNA upstream 50208 23450693 ~ 23455066 (-) False mink1
TU227911 lncRNA upstream 50428 23450913 ~ 23455066 (-) False mink1
TU227912 lncRNA upstream 50637 23451122 ~ 23455066 (-) False mink1
XM_039776991.1 mRNA downstream 1226 23376973 ~ 23384169 (-) True slc25a15b
XM_039776992.1 mRNA downstream 16312 23364403 ~ 23369083 (-) True LOC120543760
XM_039776989.1 mRNA downstream 35563 23340483 ~ 23349832 (-) True grk1b
XM_039778680.1 mRNA downstream 50108 23330467 ~ 23335287 (-) True LOC120544729
XM_039777216.1 mRNA downstream 67024 23313399 ~ 23318371 (-) True mrps31
XM_039777544.1 mRNA upstream 2773 23403258 ~ 23417274 (-) False gucy2d
XM_039777543.1 mRNA upstream 2773 23403258 ~ 23417274 (-) True gucy2d
XM_039777792.1 mRNA upstream 26309 23426794 ~ 23437928 (-) True slc12a9
XM_039777797.1 mRNA upstream 50420 23450905 ~ 23485867 (-) False mink1
XM_039777796.1 mRNA upstream 50420 23450905 ~ 23485867 (-) False mink1
TU227697 other downstream 232079 23150844 ~ 23153316 (-) True LOC120543557
TU227610 other downstream 574943 22809714 ~ 22810452 (-) True G167902
TU227366 other downstream 916802 22466583 ~ 22468593 (-) False mepcea
TU227941 other upstream 196414 23596899 ~ 23600274 (-) False rnf167
TU227963 other upstream 216790 23617275 ~ 23618121 (-) True G168162
TU228118 other upstream 403066 23803551 ~ 23811763 (-) False nlgn3b
TU228135 other upstream 520775 23921260 ~ 23925815 (-) False thoc2
TU228137 other upstream 520775 23921260 ~ 23925815 (-) False thoc2

Expression Profile