RNA id: TU245310



Basic Information


Item Value
RNA id TU245310
length 354
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G180976
representative False

Chromosome Information


Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 36119984 ~ 36126163 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


agacagacagacagacagacagacagacagacagacagacagacagacacacagacagacacacagacacagacacacagacacacacacagacagacagacagacagacagacacacacacagacacacacacagacacagacacacacacagacagacacacagacagacacacagacagacacacacacagagacacacacacagacacacacacagacacacacacacacacacacacacacagacacagacacacacacacagacacacacacacagacacacacacagacacacacacacacagacacagacacacagacacagacacacacagacacacagacacac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU245217 lncRNA downstream 49343 35973595 ~ 36070641 (-) False G180916
XR_005636663.1 lncRNA downstream 49361 36066822 ~ 36070623 (-) True LOC120545339
XR_005636675.1 lncRNA downstream 68147 36050980 ~ 36051837 (-) True LOC120545349
TU245299 lncRNA downstream 100307 36018926 ~ 36019677 (-) True G180968
TU245208 lncRNA downstream 133813 35973595 ~ 35986171 (-) False G180916
TU245308 lncRNA upstream 664 36121101 ~ 36126163 (-) True G180976
TU245318 lncRNA upstream 2642 36123079 ~ 36311704 (-) True G180978
TU245307 lncRNA upstream 5006 36125443 ~ 36126163 (-) False G180976
TU245309 lncRNA upstream 5006 36125443 ~ 36126163 (-) False G180976
TU245311 lncRNA upstream 5272 36125709 ~ 36126163 (-) False G180976
XM_039779547.1 mRNA downstream 81657 36016537 ~ 36038327 (-) True LOC120545306
XM_039779549.1 mRNA downstream 112099 36004714 ~ 36007885 (-) True LOC120545307
XM_039779563.1 mRNA downstream 130772 35923353 ~ 35989212 (-) True LOC120545315
XM_039779495.1 mRNA upstream 14621 36135058 ~ 36146319 (-) True LOC120545288
XM_039779501.1 mRNA upstream 74647 36195084 ~ 36209710 (-) True LOC120545291
XM_039779502.1 mRNA upstream 74652 36195089 ~ 36209263 (-) False LOC120545291
XM_039779500.1 mRNA upstream 74655 36195092 ~ 36209679 (-) False LOC120545291
XM_039779499.1 mRNA upstream 74656 36195093 ~ 36209710 (-) False LOC120545291
TU245228 other downstream 84084 35689754 ~ 36035900 (-) True LOC120545322
TU245221 other downstream 156391 35816790 ~ 35963593 (-) True G180916
TU245259 other downstream 545359 35572178 ~ 35574625 (-) True G180944
TU245007 other downstream 685123 35037024 ~ 35434861 (-) False LOC120545308
XR_005636645.1 other downstream 1080501 35037050 ~ 35039483 (-) False LOC120545308
TU245351 other upstream 194479 36314916 ~ 36320765 (-) False G181004
TU245355 other upstream 194479 36314916 ~ 36318463 (-) False G181004
TU245425 other upstream 453205 36573642 ~ 36576179 (-) False myo5b
TU245414 other upstream 562277 36682714 ~ 36698059 (-) False G181036
TU245418 other upstream 562277 36682714 ~ 36748618 (-) True G181036

Expression Profile