RNA id: XM_039782745.1


Basic Information

Item Value
RNA id XM_039782745.1
length 2331
RNA type mRNA
GC content 0.49
exon number 9
gene id naa30
representative False

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 14571380 ~ 14612946 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

TGCTGTTGCAATGGCGTTTGCTGCGACAGCACTTTCCGGCAGCAGGGAAATCGAGGAGAAAGCAGCGACAAACGTCGCCAGCGGATACGTGATCGCCTCAGAATCCTTGGATTTATGCGATATTCGGTGAACTAGCTTGTATATTGATTGTATATCCCTTCGCCTTGTGGATGAGCTTGTGTTCAACGTTTTCCAAGCGTGAATCTCCACCTTAATGCGGTGGGATGGCCACAGTGCCGCCTGGGCCTAGTAGCGCACTGCCTTCATCCCCGGCTGAAATTCCTCCTTTCCCCGGGGCTGGGAGCGCGGAGCCGGCGGTGGAAGACGGAGAGCCGGCTTGTCACAGGGAGGACTGTGTAACCGCCGGTACAGGGAAGACGTCGGAGCCGGTAAGCGAAGTCAATAGGTCGGTTAACAAGAAGCAAAAAAACATGCTAGCGCGAGCTAGCCCGGCGGCGCTGCACCTCAAAATGCAAGCCCGAGAGCAGCAGCTAAATGGCTTGGCCTGCCCCTTAGAGGACGCTGACAGCCACCAACACACAGGAAACCGGCCTGACAATCCGAGACCGTCCGTGGACAACTGTgacagcagtagcagcagcaatgAGGAGGCTCCAGCCGCTAGACACAATAGTGAGCATTGCCAACATGAAGGCCACAGCCCCTTCTCCAAAAACGGCAGTCACTCTCCCCTAGTTAACAATAGCATGAACGGGATGCCGGGTTTTACGAGAACTGAGGCGGCCTACAGCCACCCCAGGGACGAAGGGAAAGAGGGGTTTGACCTCACGGAGCCACCGAGACCGCCCAGCATCGAGCCGCCGGATGCCGGGCCCGGCGGAGAGGAGAGCCTCGCTGACCCGCAGCAGCCGCCCGCCGCGGAGCTAGCCCGGCTCGACCTGAGCAGCTCTCCCGGCCGAGCGGAAGAGGACAGCCACGGCATTCGCTATGTCCGCTATGAGTCCGAGCTCCAAATGCCGTGGATCATGAGACTGATCACCAAGGACTTGTCTGAGCCTTATTCAATTTACACCTACAGGTACTTCATCCACAACTGGCCGCAGCTCTGCTTTCTGGCCATGGTGGAGCAGGAGTGTGTCGGAGCCATCGTATGTAAGCTTGACATGCACAAGAAGATGTTCCGTCGTGGCTACATCGCCATGCTGGCCGTGGACTCAAAACACAGAAGGAAAAGCATCGGTACTAATCTGGTGAAGAAGGCCATCTATGCCATGGTGGAGGGTGACTGTGATGAGATTTCACACCCTCCAGAAAAAGGTCACTCAAGAGTAATGGCGTTCCAGGAGGTATGGGCAAAGAGCGTGTGTCGCCCCATGGAGCAGTTAGTGGATGTTGAGCAGGAGTACCCTGGAGAAGTGGAGTACATCTACATGCCTGCTTGTGTCCCACTTTCCCGCTGCTCTGGTTGCTGTGGGGATGAGAACCTGGAGTGCCAGGCTACCCTTGAACGCAACATCACTCTGCAGGTGATAAGGATTCATCCCATGATATCTATGCACCACGTGGAACTCACATTTGTGGAGCATCAGAGATGTGAATGCAGAGCCCGTCAGAAACTTCTGAATGACAAAAGCAGCGGTGAGTCTATCAGGAACAGACCTCGGAGAAGGAAACACAAGAAGACGGCAAACGGCTGTGGAAAgtGCCAGTTCCCTCAAAACAAGATAAATCTTCACTGATTCATGACTCTGTCCATAGTTTAATTTGGAGGAGTGACTTTGAAGTGGCAAATAACAGCTCATCTGTGAATTGATCAACTCTGATTACTAATCTTCTGTCAATATATCTTTCCTCATCCAGTGCATCCATCAGATATCCTACCTTGTCCATgacattcttttcttttttaattatcaAAGCAAACAACCATATCTGCAAACTCCTTTGCCTCTAACTGCTGTTTTTAGCAGACCATAATCAGTgtcaatttctttttcttttttttgtggattaaaaatataaataatataaaataataatatatatagacAGGATACAACAGATTCCTAATGGGTGGAATGCTGTAAACTTATCAGTGGTCAGAGAAGGATTAAGGTCTCCATCCACCCTCAATTGTTCACTGATTAATGGCAACGTTCACAGAGAGGCCAGAAACCTTCTCCATGACTTAATGTTCATTGTAATTTAGCAGAGCAACTCCTGTTATAATTGTTGTGAAACTGAAAAAGACATCATGTATGTGACTTTCTATATTATGTAAAGTGTTATTTACTAATTATGGGACATAATGTGTTTATGAGTTTATTAAATACAATGCAGTTCAAATACAAGGGGCTTCTGTGATGCATT

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008080 N-acetyltransferase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU249589 lncRNA downstream 78091 14491099 ~ 14493568 (-) True G184306
TU249570 lncRNA downstream 132704 14432231 ~ 14438955 (-) False G184295
TU249571 lncRNA downstream 132704 14432231 ~ 14438955 (-) True G184295
TU249567 lncRNA downstream 139487 14427804 ~ 14432172 (-) True G184293
TU249565 lncRNA downstream 146812 14423153 ~ 14424847 (-) True G184292
TU249640 lncRNA upstream 42711 14655657 ~ 14656247 (-) True G184346
TU249642 lncRNA upstream 54189 14667135 ~ 14667581 (-) False LOC120547045
TU249658 lncRNA upstream 58948 14671894 ~ 14677060 (-) True G184356
TU249666 lncRNA upstream 76360 14689306 ~ 14689940 (-) True G184360
TU249654 lncRNA upstream 86738 14699684 ~ 14702181 (-) True G184354
XM_039782750.1 mRNA downstream 5128 14561407 ~ 14566531 (-) True cipcb
XM_039781696.1 mRNA downstream 11199 14548038 ~ 14560460 (-) False znf410
XM_039781695.1 mRNA downstream 11199 14548038 ~ 14560460 (-) True znf410
XM_039782477.1 mRNA downstream 42306 14525235 ~ 14529353 (-) True LOC120547074
XM_039782567.1 mRNA downstream 47488 14509448 ~ 14524171 (-) True lrfn5b
XM_039782416.1 mRNA upstream 44231 14657177 ~ 14667601 (-) True LOC120547045
XM_039782856.1 mRNA upstream 64594 14677540 ~ 14680093 (-) True arf6a
XM_039782854.1 mRNA upstream 90521 14703467 ~ 14706436 (-) True fkbp3
XM_039781333.1 mRNA upstream 179167 14792113 ~ 14929662 (-) True LOC120546409
XM_039782493.1 mRNA upstream 497294 15110240 ~ 15111479 (-) True rps29
TU249578 other downstream 73289 14472201 ~ 14498370 (-) True G184299
TU249319 other downstream 1080531 13481924 ~ 13491128 (-) False mfsd2b
TU249306 other downstream 1103594 13458616 ~ 13468065 (-) True fkbp1b
TU249195 other downstream 1355835 13206307 ~ 13215824 (-) False hmgn3
TU250064 other upstream 1175968 15788914 ~ 15791558 (-) False si:dkey-177p2.18
XR_005636881.1 other upstream 1877704 16490650 ~ 16517872 (-) False snap91b
XR_005637006.1 other upstream 2216850 16829796 ~ 16835983 (-) False gpatch2
XR_005637059.1 other upstream 3149010 17761956 ~ 17762038 (-) True LOC120547356
XR_005637061.1 other upstream 3149452 17762398 ~ 17762482 (-) True LOC120547359

Expression Profile