Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU251074 |
| length | 283 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G185376 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053129.1 |
| NCBI id | CM020926.1 |
| chromosome length | 36987114 |
| location | 18396888 ~ 18397170 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0004175 | endopeptidase activity | molecular_function |
| GO:0004197 | cysteine-type endopeptidase activity | molecular_function |
| GO:0008234 | cysteine-type peptidase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU251064 | lncRNA | downstream | 78177 | 18318396 ~ 18318711 (-) | True | G185368 |
| XR_005636852.1 | lncRNA | downstream | 210301 | 18183960 ~ 18186587 (-) | True | LOC120546287 |
| TU251009 | lncRNA | downstream | 256681 | 18137725 ~ 18140207 (-) | True | G185320 |
| TU250976 | lncRNA | downstream | 335540 | 18060389 ~ 18061348 (-) | True | G185295 |
| TU250975 | lncRNA | downstream | 338716 | 18057420 ~ 18058172 (-) | True | G185294 |
| TU251176 | lncRNA | upstream | 239214 | 18636384 ~ 18636662 (-) | True | G185454 |
| TU251180 | lncRNA | upstream | 243251 | 18640421 ~ 18642958 (-) | True | LOC120546357 |
| TU251181 | lncRNA | upstream | 247206 | 18644376 ~ 18645172 (-) | False | LOC120546357 |
| TU251193 | lncRNA | upstream | 297384 | 18694554 ~ 18694796 (-) | True | G185467 |
| TU251160 | lncRNA | upstream | 298511 | 18695681 ~ 18698228 (-) | True | G185438 |
| XM_039781466.1 | mRNA | downstream | 82421 | 18295245 ~ 18314467 (-) | False | ptk2bb |
| XM_039781468.1 | mRNA | downstream | 85048 | 18295245 ~ 18311840 (-) | False | ptk2bb |
| XM_039781467.1 | mRNA | downstream | 86227 | 18295245 ~ 18310661 (-) | False | ptk2bb |
| XM_039781469.1 | mRNA | downstream | 87317 | 18295245 ~ 18309571 (-) | False | ptk2bb |
| XM_039781470.1 | mRNA | downstream | 88356 | 18293837 ~ 18308532 (-) | True | ptk2bb |
| XM_039782052.1 | mRNA | upstream | 92645 | 18489815 ~ 18506198 (-) | True | LOC120546829 |
| XM_039781275.1 | mRNA | upstream | 243571 | 18640741 ~ 18647401 (-) | False | LOC120546357 |
| XM_039781659.1 | mRNA | upstream | 261739 | 18658909 ~ 18667719 (-) | True | LOC120546602 |
| XM_039781660.1 | mRNA | upstream | 263378 | 18660548 ~ 18667719 (-) | False | LOC120546602 |
| XM_039781658.1 | mRNA | upstream | 263378 | 18660548 ~ 18667719 (-) | False | LOC120546602 |
| XR_005637051.1 | other | downstream | 328275 | 18068498 ~ 18068613 (-) | True | LOC120547347 |
| TU250885 | other | downstream | 483852 | 17911270 ~ 17913036 (-) | True | G185233 |
| TU250856 | other | downstream | 630248 | 17764805 ~ 17766640 (-) | False | zgc:153284 |
| TU250853 | other | downstream | 630248 | 17764922 ~ 17766640 (-) | False | zgc:153284 |
| XR_005637056.1 | other | downstream | 634080 | 17762733 ~ 17762808 (-) | True | LOC120547353 |
| TU251109 | other | upstream | 92646 | 18489816 ~ 18492858 (-) | False | LOC120546829 |
| TU251114 | other | upstream | 96138 | 18493308 ~ 18506188 (-) | False | LOC120546829 |
| XR_005636828.1 | other | upstream | 380960 | 18778130 ~ 18789415 (-) | False | abcd4 |
| TU251888 | other | upstream | 2165267 | 20562437 ~ 20567479 (-) | True | G186006 |
| unassigned_transcript_1082 | other | upstream | 2480694 | 20877864 ~ 20877946 (-) | True | trnal-uaa_20 |
