RNA id: TU258722


Basic Information

Item Value
RNA id TU258722
length 254
lncRNA type sense_over
GC content 0.50
exon number 3
gene id G190678
representative True

Chromosome Information

Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 1483750 ~ 1520331 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtgggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctgtgtgtgtctctgtgtgtgtgtctctgtatgtgtatgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctctgtgtgtctctgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgcgtgtgtgtgtgtctgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU258783 lncRNA upstream 31163 1409029 ~ 1452587 (+) True G190730
TU258716 lncRNA upstream 64216 1385000 ~ 1419534 (+) True G190672
TU258712 lncRNA upstream 75580 1393388 ~ 1408170 (+) True G190668
TU258713 lncRNA upstream 97103 1377488 ~ 1386647 (+) True G190669
TU258779 lncRNA upstream 108383 1374929 ~ 1375367 (+) True G190726
TU258724 lncRNA downstream 2889 1523220 ~ 1527933 (+) True G190680
TU258788 lncRNA downstream 14966 1535297 ~ 1539838 (+) True G190735
TU258834 lncRNA downstream 162160 1682491 ~ 1690886 (+) True G190765
TU258854 lncRNA downstream 175407 1695738 ~ 1698673 (+) True G190784
TU258864 lncRNA downstream 181225 1701556 ~ 1779982 (+) False G190785
XM_039784491.1 mRNA upstream 14499 1463237 ~ 1469251 (+) True LOC120548322
XM_039783917.1 mRNA upstream 131419 1349395 ~ 1352331 (+) True LOC120548015
XM_039784322.1 mRNA upstream 148806 1333473 ~ 1334944 (+) True LOC120548224
XM_039784681.1 mRNA upstream 204165 1268100 ~ 1279585 (+) True LOC120548417
XM_039784680.1 mRNA upstream 213221 1261525 ~ 1270529 (+) False LOC120548416
XM_039784294.1 mRNA downstream 109146 1629477 ~ 1669861 (+) True LOC120548209
XM_039784686.1 mRNA downstream 229573 1749904 ~ 1751977 (+) True LOC120548423
XM_039784012.1 mRNA downstream 328982 1849313 ~ 1855707 (+) True LOC120548061
XM_039784691.1 mRNA downstream 358087 1878418 ~ 1882048 (+) True LOC120548429
XM_039784692.1 mRNA downstream 365620 1885951 ~ 1925546 (+) True LOC120548430
TU258760 other upstream 131152 1349438 ~ 1352598 (+) False G190713
TU258747 other upstream 196923 1286410 ~ 1286827 (+) True G190700
TU258691 other upstream 211844 1144425 ~ 1271906 (+) False LOC120548410
TU258792 other downstream 14966 1535297 ~ 1539838 (+) False G190735
TU258825 other downstream 22525 1542856 ~ 1543292 (+) True G190757
TU258826 other downstream 61503 1581834 ~ 1615546 (+) True G190758
TU258856 other downstream 192824 1713155 ~ 1720117 (+) False G190785
TU259572 other downstream 428059 1948390 ~ 1949234 (+) True G191212

Expression Profile