RNA id: TU263563



Basic Information


Item Value
RNA id TU263563
length 253
lncRNA type inter_gene
GC content 0.61
exon number 1
gene id G194120
representative True

Chromosome Information


Item Value
chromosome id NC_053130.1
NCBI id CM020927.1
chromosome length 36824488
location 15857124 ~ 15857376 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


cacggtggctcagtggttagcacttctgcctcacagcaagaaggttctgggttcgatcCCAGGTCgtcccaggcctttctgtgtggagtttgcatgttctccccgtgcttgcgtgggttttctccgggtgctccggtttcttcccaccacaaagacatgcatgcaaccacgcccgccgatagggggggacaaacgggtctgttgtcccgggcccagagtaggggggggcccagaactgggggcccagaactgg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU263562 lncRNA upstream 33359 15821025 ~ 15823765 (+) True G194119
TU263554 lncRNA upstream 53634 15802081 ~ 15803490 (+) False LOC120548468
TU263343 lncRNA upstream 623336 15229947 ~ 15233788 (+) False zgc:91976
TU263331 lncRNA upstream 685482 15169606 ~ 15171642 (+) True G193957
TU263319 lncRNA upstream 697455 15158382 ~ 15159669 (+) True G193947
TU263570 lncRNA downstream 55419 15912795 ~ 16129650 (+) True lrmda
TU263575 lncRNA downstream 290977 16148353 ~ 16156796 (+) True G194128
TU263679 lncRNA downstream 479924 16337300 ~ 16340067 (+) True G194183
XR_005637136.1 lncRNA downstream 500519 16357895 ~ 16359362 (+) True LOC120548058
TU263756 lncRNA downstream 690105 16547481 ~ 16553436 (+) True G194231
XM_039783245.1 mRNA upstream 42538 15806373 ~ 15814586 (+) True vdac2
XM_039784732.1 mRNA upstream 53609 15794970 ~ 15803515 (+) True LOC120548468
XM_039783239.1 mRNA upstream 63043 15790076 ~ 15794081 (+) True LOC120547687
XM_039784726.1 mRNA downstream 55386 15912762 ~ 16129667 (+) False lrmda
XM_039784711.1 mRNA downstream 505377 16362753 ~ 16396088 (+) True zcchc24
XM_039784710.1 mRNA downstream 505377 16362753 ~ 16391951 (+) False zcchc24
XM_039783431.1 mRNA downstream 704521 16561897 ~ 16566248 (+) True ppa1b
XM_039783433.1 mRNA downstream 709896 16567272 ~ 16571799 (+) True sar1ab
TU263049 other upstream 1780667 14074642 ~ 14076457 (+) True G193730
XR_005637191.1 other upstream 3485854 12351324 ~ 12371270 (+) False LOC120548560
TU263682 other downstream 495815 16353191 ~ 16353831 (+) True G194185
TU263878 other downstream 1032024 16889400 ~ 16890950 (+) True G194325
XR_005637204.1 other downstream 2711607 18568983 ~ 18569123 (+) True LOC120548592
TU264570 other downstream 2823613 18680989 ~ 18682296 (+) False prdm8
TU264674 other downstream 2987054 18844430 ~ 18850903 (+) True G194908

Expression Profile