Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00071192 |
| length | 745 |
| RNA type | processed_transcript |
| GC content | 0.50 |
| exon number | 5 |
| gene id | XLOC_036419 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007119.7 |
| NCBI id | CM002892.2 |
| chromosome length | 54304671 |
| location | 22761854 ~ 22838364 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007165 | signal transduction | biological_process |
| GO:0005911 | cell-cell junction | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-060503-115 | Predicted to be involved in signal transduction. Predicted to be located in cell junction and membrane. Predicted to be active in cell-cell junction and cytoplasm. Orthologous to human MAGIX (MAGI family member, X-linked). |
| ensembl_id | ENSDART00000138062 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00072450 | lncRNA | downstream | 291814 | 22405875 ~ 22474642 (-) | True | XLOC_036413 |
| TCONS_00072449 | lncRNA | downstream | 332346 | 22384742 ~ 22434110 (-) | True | XLOC_036411 |
| TCONS_00072448 | lncRNA | downstream | 338437 | 22383250 ~ 22428019 (-) | True | XLOC_036410 |
| TCONS_00071168 | lncRNA | downstream | 423234 | 22341606 ~ 22343222 (-) | True | XLOC_036409 |
| TCONS_00071167 | lncRNA | downstream | 423253 | 22341606 ~ 22343203 (-) | False | XLOC_036409 |
| TCONS_00072451 | lncRNA | upstream | 78782 | 22862004 ~ 22867103 (-) | True | XLOC_036421 |
| TCONS_00072452 | lncRNA | upstream | 338291 | 23121513 ~ 23123787 (-) | False | XLOC_036425 |
| TCONS_00072033 | lncRNA | upstream | 351478 | 23134700 ~ 23136454 (-) | False | XLOC_036426 |
| TCONS_00072032 | lncRNA | upstream | 351478 | 23134700 ~ 23136454 (-) | False | XLOC_036426 |
| TCONS_00072034 | lncRNA | upstream | 352460 | 23135682 ~ 23137249 (-) | False | XLOC_036426 |
| TCONS_00071182 | mRNA | downstream | 26699 | 22567363 ~ 22739757 (-) | False | XLOC_036418 |
| TCONS_00071185 | mRNA | downstream | 26699 | 22618504 ~ 22739757 (-) | False | XLOC_036418 |
| TCONS_00071188 | mRNA | downstream | 67805 | 22622506 ~ 22698651 (-) | True | XLOC_036418 |
| TCONS_00071184 | mRNA | downstream | 105778 | 22618504 ~ 22660678 (-) | False | XLOC_036418 |
| TCONS_00071187 | mRNA | downstream | 123732 | 22622506 ~ 22642724 (-) | False | XLOC_036418 |
| TCONS_00071195 | mRNA | upstream | 179468 | 22962690 ~ 22964486 (-) | False | XLOC_036422 |
| TCONS_00071196 | mRNA | upstream | 180930 | 22964152 ~ 22965214 (-) | True | XLOC_036422 |
| TCONS_00071197 | mRNA | upstream | 182395 | 22965617 ~ 22965916 (-) | True | XLOC_036423 |
| TCONS_00071198 | mRNA | upstream | 257505 | 23040727 ~ 23081640 (-) | False | XLOC_036424 |
| TCONS_00071199 | mRNA | upstream | 261532 | 23044754 ~ 23081511 (-) | False | XLOC_036424 |
| TCONS_00071180 | other | downstream | 227506 | 22536028 ~ 22538950 (-) | True | XLOC_036416 |
| TCONS_00071179 | other | downstream | 227780 | 22533571 ~ 22538676 (-) | False | XLOC_036416 |
| TCONS_00071166 | other | downstream | 424135 | 22341606 ~ 22342321 (-) | False | XLOC_036409 |
| TCONS_00071164 | other | downstream | 439753 | 22320847 ~ 22326703 (-) | False | XLOC_036408 |
| TCONS_00071158 | other | downstream | 479245 | 22284294 ~ 22287211 (-) | False | XLOC_036407 |
| TCONS_00071194 | other | upstream | 61478 | 22844700 ~ 22845798 (-) | True | XLOC_036420 |
| TCONS_00071201 | other | upstream | 338929 | 23122151 ~ 23122372 (-) | False | XLOC_036425 |
| TCONS_00071202 | other | upstream | 339540 | 23122762 ~ 23122874 (-) | True | XLOC_036425 |
| TCONS_00071249 | other | upstream | 2259979 | 25043201 ~ 25044808 (-) | True | XLOC_036463 |
| TCONS_00071268 | other | upstream | 2867007 | 25650229 ~ 25665761 (-) | False | XLOC_036471 |
