RNA id: TU270573



Basic Information


Item Value
RNA id TU270573
length 312
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G199575
representative True

Chromosome Information


Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 2246954 ~ 2247265 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


caaaaaaagataaaattcaAATTGACTTAAGTCAAAACAATCAAAAGTATAAATACACCACTATTCGCTAGTAGACCTTAAATCAGGTTTAACGTGGAGATCCTCCAGCAGACTTACGTCCTACTACCTTCACATATACTCCAGCTCTGTTCCCCTGAGCAAACACATGGCCACCCTATATAGCCTGACGCCACCCCTCAAATTGGAACATACCAACATGTAAAACTCAGGGGTGGCTCAGGTGAGTAGGCCGTAATGGCTTCATAcagcacacataaatatacaacaATCTAAATAGATACAACATATAAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU270567 lncRNA upstream 51587 2195128 ~ 2195367 (+) True G199570
XR_005637433.1 lncRNA upstream 105195 2139562 ~ 2141759 (+) True LOC120549790
TU270550 lncRNA upstream 124791 2121964 ~ 2122163 (+) True G199553
TU270548 lncRNA upstream 137132 2109495 ~ 2109822 (+) True G199551
TU270546 lncRNA upstream 140586 2106072 ~ 2106368 (+) True G199549
TU270574 lncRNA downstream 245 2247510 ~ 2270865 (+) True G199576
TU270575 lncRNA downstream 18311 2265576 ~ 2265983 (+) True G199577
XR_005637345.1 lncRNA downstream 158511 2405776 ~ 2407264 (+) True LOC120549196
TU270592 lncRNA downstream 177260 2424525 ~ 2425493 (+) True G199593
TU270634 lncRNA downstream 243165 2490430 ~ 2490630 (+) True G199630
XM_039785387.1 mRNA upstream 93993 2142172 ~ 2152961 (+) True LOC120548871
XM_039785386.1 mRNA upstream 427333 1818203 ~ 1819621 (+) True LOC120548870
XM_039785385.1 mRNA upstream 446225 1793880 ~ 1800729 (+) True LOC120548869
XM_039785383.1 mRNA upstream 454236 1790235 ~ 1792718 (+) True LOC120548868
XM_039785381.1 mRNA upstream 1245530 996621 ~ 1001424 (+) True LOC120548863
XM_039785389.1 mRNA downstream 14928 2262193 ~ 2264878 (+) True LOC120548873
XM_039785391.1 mRNA downstream 184041 2431306 ~ 2432865 (+) True LOC120548876
XM_039785901.1 mRNA downstream 220689 2467954 ~ 2470455 (+) False LOC120549189
XM_039785900.1 mRNA downstream 220817 2468082 ~ 2470455 (+) True LOC120549189
XM_039785393.1 mRNA downstream 266246 2513511 ~ 2514641 (+) True LOC120548878
TU270561 other upstream 87571 2158890 ~ 2159383 (+) True G199564
XR_005637481.1 other upstream 363142 1883694 ~ 1883812 (+) True LOC120549988
XR_005637688.1 other upstream 363364 1883472 ~ 1883590 (+) True LOC120550216
XR_005637689.1 other upstream 365341 1881494 ~ 1881613 (+) True LOC120550217
XR_005637586.1 other upstream 365565 1881271 ~ 1881389 (+) True LOC120550109
TU270658 other downstream 300720 2547985 ~ 2548539 (+) True G199652
TU270700 other downstream 445208 2692473 ~ 2693453 (+) True G199689
TU270958 other downstream 1248815 3496080 ~ 3523889 (+) True G199885
TU271252 other downstream 2794694 5041959 ~ 5053742 (+) True G200129
XR_005637303.1 other downstream 2853203 5100468 ~ 5187407 (+) False apoba

Expression Profile