RNA id: XM_039785107.1


Basic Information

Item Value
RNA id XM_039785107.1
length 1982
RNA type mRNA
GC content 0.61
exon number 4
gene id bag5
representative True

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 6570186 ~ 6587823 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ACAATATCAAAATGGAGCACACCCATGTTGGACGACCAAAACTTACACGACGTCAAAACATAGCTAAGTCTATCACCGGCAAAATGACACGTTAATGCTTTTTATTCTACGTCGACGTGTATTTAATACACGTCAACTAAACACCGATTAACATTTTGTATTCGTCGAGATAAACAAACGCCGGTTAAACGGGTTTATCCCCCCCCTCAAAGGAGCGAAGAGAAACTCCGCGTTAGTTCGTACGCGTGAGCTGGAAAgtaaggtaacgttagctaggtagGCTAATGTTTAGCTTTAATCGGGGGAGGTGCGCACTTTTCCGCAACAGTTCAGATGGCTGTACGCTGGCTATGCAGggggTGGTTATCCATCTGGATGCCACTTTGCTCCACGACCCGCCCTGCTGTGGCCGATGGAAACAGACATCCGTAGAGATGTGCGCGCATGTATTCGGAGTTTTAAAAAGCCTGTTTGGGAAGCCCTTTGATGGTGGGAAGAGGATGGACCATGGCGgcccacagcagcagcaacatcccatggagcagcagcagcagccataccACCCGCAGCACCCCGCCATGATGCGGCTGTACGAGGTCCAGAAGGAGGTGGCGTCCCTGGGCCCTCAGGTCTGCACCTTCAGCGGCCTGCAAAACGACCGCGACTACAAGCGGCTGGAGCGCGAGCTGACGCGGCTGCTGCTGGAGGTGGACCAGGTGGACACAGAGGGCAAGGCGGAGCTGCAGGGGGCGCGCAAGAGGGCAGCCCAGGAGGTGGAGGGCCTCCTGCGCTACCTGGAGGAGAACGCCACCCATCCGTCCCGCATGGCCATCGAGGAGCTGAGCAACGAGGCGCGGCAGCTGGTGGACGACCGCGTGGTGGCGCCCCAGCGCTCGGGCGGCGCGGCGGAGATCAACGACGAGCTCGTCGACGCCCTGCAGGAGATCGTGCTGCGGTTGACCCAAGTCAAGACCGAGGGGCGGGTGCCGCTTCGCAAGGCGCGCTACCGGGCGCTGACCCGCATGTGCGCCGTGCAGGACGTGATCGAAGGGCGCACGCAGCAGCAGACCCTCTCCCTACCGCTGTCGGGGGACACCCACGAGGCCGTGCACCGCATCAACCAGGTGATGGTGAAGGTGAGCGTGGCGCGCAGTCAGCTGGTGGCCCTGCTGATGGGCCTGAGCGGCCGGGACAGCTGCACCCACCTGTCCCGAATCCTCACCGAGATGCAGGTGGAGCTGGACGCTCTGGATGTTTCCGGGAACGCGGCCATCCGCAACTACAGGAAACAGGTCGTGGAGGAGATAAACGGGCTGCTTAAACATCTGGATCTGGAGGTGGAAGGAGACGACACGCGCAGGTACGACTTGGGGCAGAACAACTCCATCCGGGAGATTGAGGCGGTGCGAGCTCACGTCTCCCACCTGCGAGACGGCGTCCTGCGGCACTGCATCATGGGGGATCTGAGCTTCAGGCCCAAGGCCGAGCTGCAGAGCCTGCTCACTCACCTGGACCAGGTGGACACGGGCAGAAACCCGTGCATCCGGGAGGCCCGCCGGCGCGCCGTGGTGGAGGTCCAGGCCATCATCACCTTCCTGGACCTGCGCGAGGCTCTGGCCCGCCGCCAGCCGGGCCCCAGCGAGCACCCGTCGCACCGGGCCGTGTGGCTGGTCCTGGGCAGCCTCTCGGACCTCCAGGCCCAGGCGCTGGGCTTCGACGGCAAGCGACTCGACAAGAGCTACATGATGCTCGAGGAGCTGCTGACCAAACAGCTGTTGGCGCTAGACGCCGTGGACCCGCAGGGCGACGAGACCACCAAGATGGCGCGGAAGCAGGCCGTGAAGTTTGCCCAGAACATTCTCAACTACCTGGACATGAAGACGGACGAGTGGGAGTATTGATGCCATGTTGCTAGACCGGCACGCCGGATGGGACGTCGCTGCAGGAAAGAAAGGAGCTGATAATGtgtgtaaatttaaaaa

Function

GO: NA

KEGG:

id description
K09559 BAG5; BCL2-associated athanogene 5

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU271652 lncRNA upstream 32946 6528157 ~ 6539574 (+) True G200475
TU271623 lncRNA upstream 49754 6515903 ~ 6522766 (+) True G200451
TU271645 lncRNA upstream 66980 6502722 ~ 6505540 (+) True G200471
TU271612 lncRNA upstream 165396 6403452 ~ 6407124 (+) False LOC120548987
XR_005637293.1 lncRNA upstream 165403 6400152 ~ 6407117 (+) False LOC120548987
TU271621 lncRNA downstream 4593 6592416 ~ 6595818 (+) True G200450
TU271627 lncRNA downstream 9951 6597774 ~ 6598392 (+) True G200455
TU271664 lncRNA downstream 44662 6632485 ~ 6634504 (+) True G200484
TU271680 lncRNA downstream 128113 6715936 ~ 6725723 (+) True G200498
TU271692 lncRNA downstream 177416 6765239 ~ 6768572 (+) False LOC120549783
XM_039785498.1 mRNA upstream 146476 6421737 ~ 6426044 (+) True LOC120548986
XM_039786317.1 mRNA upstream 854412 5715238 ~ 5718108 (+) True LOC120549412
XM_039786316.1 mRNA upstream 857393 5573422 ~ 5715127 (+) True LOC120549411
XM_039785398.1 mRNA upstream 1001973 5376998 ~ 5570547 (+) True LOC120548886
XM_039786610.1 mRNA upstream 1300732 5271159 ~ 5271788 (+) True LOC120549592
XM_039785117.1 mRNA downstream 62969 6650792 ~ 6658601 (+) False ckba
XM_039785118.1 mRNA downstream 65134 6652957 ~ 6658591 (+) True ckba
XM_039786599.1 mRNA downstream 154176 6741999 ~ 6747402 (+) False vps29
XM_039786598.1 mRNA downstream 154199 6742022 ~ 6747402 (+) False vps29
XM_039786910.1 mRNA downstream 170814 6758637 ~ 6768662 (+) True LOC120549783
TU271624 other upstream 763 6568276 ~ 6571757 (+) True G200452
XR_005637381.1 other upstream 854412 5715217 ~ 5718108 (+) False LOC120549412
TU271419 other upstream 857403 5709685 ~ 5715117 (+) False LOC120549411
XR_005637303.1 other upstream 1385113 5100468 ~ 5187407 (+) False apoba
TU271252 other upstream 1518778 5041959 ~ 5053742 (+) True G200129
TU271673 other downstream 89835 6677658 ~ 6682591 (+) True G200492
TU271685 other downstream 144425 6732248 ~ 6734946 (+) False vps29
TU271684 other downstream 149487 6737310 ~ 6747395 (+) True vps29
XR_005637545.1 other downstream 234290 6822113 ~ 6822319 (+) True LOC120550058
XR_005637549.1 other downstream 235432 6823255 ~ 6823461 (+) True LOC120550062

Expression Profile