Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005637411.1 |
| length | 1366 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 2 |
| gene id | LOC120549606 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053131.1 |
| NCBI id | CM020928.1 |
| chromosome length | 36057207 |
| location | 3750890 ~ 3755742 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0005911 | cell-cell junction | cellular_component |
| GO:0005921 | gap junction | cellular_component |
| GO:0005922 | connexin complex | cellular_component |
| GO:0030054 | cell junction | cellular_component |
| GO:0005198 | structural molecule activity | molecular_function |
| GO:0005212 | structural constituent of eye lens | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU270955 | lncRNA | upstream | 295922 | 3449558 ~ 3454968 (+) | True | G199882 |
| TU270918 | lncRNA | upstream | 406298 | 3337003 ~ 3344592 (+) | True | G199849 |
| TU270919 | lncRNA | upstream | 412888 | 3337003 ~ 3338002 (+) | False | G199849 |
| XR_005637377.1 | lncRNA | upstream | 430552 | 3318435 ~ 3320338 (+) | False | LOC120549373 |
| TU270895 | lncRNA | upstream | 430557 | 3316535 ~ 3320333 (+) | True | LOC120549373 |
| TU271007 | lncRNA | downstream | 56319 | 3812061 ~ 3812316 (+) | True | G199924 |
| TU271025 | lncRNA | downstream | 369891 | 4125633 ~ 4126336 (+) | True | G199942 |
| TU271034 | lncRNA | downstream | 460222 | 4215964 ~ 4216402 (+) | True | G199950 |
| TU271038 | lncRNA | downstream | 490035 | 4245777 ~ 4251985 (+) | True | G199953 |
| XR_005637260.1 | lncRNA | downstream | 578901 | 4334643 ~ 4336340 (+) | True | LOC120548712 |
| XM_039786306.1 | mRNA | upstream | 228058 | 3501371 ~ 3522832 (+) | False | vrk1 |
| XM_039786305.1 | mRNA | upstream | 228058 | 3501610 ~ 3522832 (+) | True | vrk1 |
| XM_039785176.1 | mRNA | upstream | 366286 | 3369799 ~ 3384604 (+) | True | ak7b |
| XM_039785395.1 | mRNA | upstream | 405306 | 3344816 ~ 3345584 (+) | True | LOC120548881 |
| XM_039785814.1 | mRNA | upstream | 476019 | 3259535 ~ 3274871 (+) | True | im:7136021 |
| XM_039787073.1 | mRNA | downstream | 642908 | 4398650 ~ 4421094 (+) | True | dio2 |
| XM_039786714.1 | mRNA | downstream | 672070 | 4427812 ~ 4484962 (+) | True | LOC120549660 |
| XM_039785561.1 | mRNA | downstream | 1266916 | 5022658 ~ 5024934 (+) | False | LOC120549013 |
| XM_039785562.1 | mRNA | downstream | 1267680 | 5023422 ~ 5024934 (+) | False | LOC120549013 |
| XM_039785558.1 | mRNA | downstream | 1267683 | 5023425 ~ 5024934 (+) | True | LOC120549013 |
| TU270958 | other | upstream | 227001 | 3496080 ~ 3523889 (+) | True | G199885 |
| TU270700 | other | upstream | 1057437 | 2692473 ~ 2693453 (+) | True | G199689 |
| TU270658 | other | upstream | 1202351 | 2547985 ~ 2548539 (+) | True | G199652 |
| TU270561 | other | upstream | 1591507 | 2158890 ~ 2159383 (+) | True | G199564 |
| XR_005637481.1 | other | upstream | 1867078 | 1883694 ~ 1883812 (+) | True | LOC120549988 |
| TU271252 | other | downstream | 1286217 | 5041959 ~ 5053742 (+) | True | G200129 |
| XR_005637303.1 | other | downstream | 1344726 | 5100468 ~ 5187407 (+) | False | apoba |
| TU271419 | other | downstream | 1953943 | 5709685 ~ 5715117 (+) | False | LOC120549411 |
| XR_005637381.1 | other | downstream | 1959475 | 5715217 ~ 5718108 (+) | False | LOC120549412 |
| TU271624 | other | downstream | 2812534 | 6568276 ~ 6571757 (+) | True | G200452 |
