RNA id: XR_005637604.1


Basic Information

Item Value
RNA id XR_005637604.1
length 119
RNA type rRNA
GC content 0.54
exon number 1
gene id LOC120550128
representative True

Chromosome Information

Item Value
chromosome id NC_053131.1
NCBI id CM020928.1
chromosome length 36057207
location 1417805 ~ 1417923 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GCTTatggccataccaccctgaatacgcccgatctcgtttgatctcggaagctaagcaaggtagggccgagtcagtacttggatgggagactacctgggaatacccggtgctgtaagct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005637409.1 lncRNA upstream 118638 1298401 ~ 1299167 (+) True LOC120549593
TU270352 lncRNA upstream 118638 1298505 ~ 1299167 (+) False LOC120549593
XR_005637410.1 lncRNA upstream 119410 1297929 ~ 1298395 (+) True LOC120549594
TU270336 lncRNA upstream 281278 1135925 ~ 1136527 (+) True G199377
TU270334 lncRNA upstream 284451 1133100 ~ 1133354 (+) True G199375
XR_005637270.1 lncRNA downstream 119907 1537830 ~ 1542581 (+) True LOC120548740
XR_005637273.1 lncRNA downstream 119912 1537835 ~ 1542579 (+) False LOC120548740
TU270372 lncRNA downstream 120265 1538188 ~ 1542521 (+) False LOC120548740
XR_005637271.1 lncRNA downstream 120437 1538360 ~ 1542579 (+) False LOC120548740
XR_005637272.1 lncRNA downstream 120437 1538360 ~ 1542579 (+) False LOC120548740
XM_039785381.1 mRNA upstream 416381 996621 ~ 1001424 (+) True LOC120548863
XM_039785914.1 mRNA upstream 759732 656330 ~ 658073 (+) True LOC120549204
XM_039786597.1 mRNA upstream 990270 425361 ~ 427535 (+) True LOC120549579
XM_039785912.1 mRNA upstream 1295252 121003 ~ 122553 (+) True LOC120549203
XM_039786551.1 mRNA upstream 1355635 57972 ~ 62170 (+) True LOC120549549
XM_039785383.1 mRNA downstream 372312 1790235 ~ 1792718 (+) True LOC120548868
XM_039785385.1 mRNA downstream 375957 1793880 ~ 1800729 (+) True LOC120548869
XM_039785386.1 mRNA downstream 400280 1818203 ~ 1819621 (+) True LOC120548870
XM_039785387.1 mRNA downstream 724249 2142172 ~ 2152961 (+) True LOC120548871
XM_039785389.1 mRNA downstream 844270 2262193 ~ 2264878 (+) True LOC120548873
XR_005637690.1 other upstream 104 1417583 ~ 1417701 (+) True LOC120550218
XR_005637723.1 other upstream 327 1417360 ~ 1417478 (+) True LOC120550381
XR_005637612.1 other upstream 772 1416915 ~ 1417033 (+) True LOC120550136
XR_005637657.1 other upstream 2324 1415362 ~ 1415481 (+) True LOC120550183
XR_005637649.1 other upstream 2770 1414917 ~ 1415035 (+) True LOC120550175
XR_005637570.1 other downstream 105 1418028 ~ 1418146 (+) True LOC120550092
XR_005637662.1 other downstream 328 1418251 ~ 1418369 (+) True LOC120550188
XR_005637693.1 other downstream 551 1418474 ~ 1418592 (+) True LOC120550221
XR_005637681.1 other downstream 1655 1419578 ~ 1419696 (+) True LOC120550209
XR_005637664.1 other downstream 3213 1421136 ~ 1421254 (+) True LOC120550191