Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU48651 |
| length | 955 |
| RNA type | TUCP |
| GC content | 0.53 |
| exon number | 2 |
| gene id | setmar |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053115.1 |
| NCBI id | CM020912.1 |
| chromosome length | 44863486 |
| location | 6635280 ~ 6638523 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU48649 | lncRNA | upstream | 53999 | 6578980 ~ 6581303 (+) | True | LOC120556885 |
| XR_005638905.1 | lncRNA | upstream | 54154 | 6578980 ~ 6581148 (+) | False | LOC120556885 |
| TU48648 | lncRNA | upstream | 60955 | 6574146 ~ 6574347 (+) | True | G36299 |
| TU48637 | lncRNA | upstream | 91228 | 6543467 ~ 6544074 (+) | True | G36288 |
| TU48563 | lncRNA | upstream | 202193 | 6429507 ~ 6433109 (+) | True | G36231 |
| TU48723 | lncRNA | downstream | 134349 | 6772736 ~ 6773170 (+) | True | G36353 |
| TU48740 | lncRNA | downstream | 309692 | 6948079 ~ 6951049 (+) | True | G36368 |
| TU48741 | lncRNA | downstream | 315065 | 6953452 ~ 6953907 (+) | True | G36369 |
| TU48742 | lncRNA | downstream | 317146 | 6955533 ~ 6955855 (+) | True | G36370 |
| TU48783 | lncRNA | downstream | 476062 | 7114449 ~ 7117220 (+) | True | G36408 |
| XM_039799097.1 | mRNA | upstream | 16087 | 6605370 ~ 6619215 (+) | True | lrrn1 |
| XM_039796839.1 | mRNA | upstream | 93871 | 6537541 ~ 6541431 (+) | True | si:dkey-178o16.4 |
| XM_039796838.1 | mRNA | upstream | 97878 | 6529451 ~ 6537424 (+) | False | trnt1 |
| XM_039796837.1 | mRNA | upstream | 97878 | 6529460 ~ 6537424 (+) | True | trnt1 |
| XM_039796834.1 | mRNA | upstream | 114141 | 6466816 ~ 6521161 (+) | False | LOC120556937 |
| XM_039796658.1 | mRNA | downstream | 9928 | 6648315 ~ 6753630 (+) | True | itpr1b |
| XM_039796664.1 | mRNA | downstream | 9928 | 6648315 ~ 6753630 (+) | False | itpr1b |
| XM_039796667.1 | mRNA | downstream | 9928 | 6648315 ~ 6753630 (+) | False | itpr1b |
| XM_039796663.1 | mRNA | downstream | 9928 | 6648315 ~ 6753630 (+) | False | itpr1b |
| XM_039796670.1 | mRNA | downstream | 9928 | 6648315 ~ 6753630 (+) | False | itpr1b |
| TU48489 | other | upstream | 582533 | 6035100 ~ 6052769 (+) | False | rybpb |
| TU48469 | other | upstream | 710902 | 5920924 ~ 5924400 (+) | True | G36156 |
| XR_005638977.1 | other | upstream | 1701138 | 4911700 ~ 4934164 (+) | True | cdk5rap1 |
| XR_005638978.1 | other | upstream | 1701138 | 4911700 ~ 4934164 (+) | False | cdk5rap1 |
| TU48133 | other | upstream | 2049827 | 4556704 ~ 4585475 (+) | False | G35921 |
| TU48863 | other | downstream | 603822 | 7242209 ~ 7258950 (+) | False | G36458 |
| TU49260 | other | downstream | 1589375 | 8227762 ~ 8228720 (+) | True | G36744 |
| unassigned_transcript_183 | other | downstream | 1978611 | 8616998 ~ 8617069 (+) | True | trnae-cuc_4 |
| unassigned_transcript_186 | other | downstream | 2003643 | 8642030 ~ 8642101 (+) | True | trnae-cuc_5 |
| unassigned_transcript_189 | other | downstream | 2072622 | 8711009 ~ 8711080 (+) | True | trnae-cuc_6 |
