Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU48723 |
| length | 435 |
| lncRNA type | inter_gene |
| GC content | 0.31 |
| exon number | 1 |
| gene id | G36353 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053115.1 |
| NCBI id | CM020912.1 |
| chromosome length | 44863486 |
| location | 6772736 ~ 6773170 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU48649 | lncRNA | upstream | 191433 | 6578980 ~ 6581303 (+) | True | LOC120556885 |
| XR_005638905.1 | lncRNA | upstream | 191588 | 6578980 ~ 6581148 (+) | False | LOC120556885 |
| TU48648 | lncRNA | upstream | 198389 | 6574146 ~ 6574347 (+) | True | G36299 |
| TU48637 | lncRNA | upstream | 228662 | 6543467 ~ 6544074 (+) | True | G36288 |
| TU48563 | lncRNA | upstream | 339627 | 6429507 ~ 6433109 (+) | True | G36231 |
| TU48740 | lncRNA | downstream | 174909 | 6948079 ~ 6951049 (+) | True | G36368 |
| TU48741 | lncRNA | downstream | 180282 | 6953452 ~ 6953907 (+) | True | G36369 |
| TU48742 | lncRNA | downstream | 182363 | 6955533 ~ 6955855 (+) | True | G36370 |
| TU48783 | lncRNA | downstream | 341279 | 7114449 ~ 7117220 (+) | True | G36408 |
| TU48784 | lncRNA | downstream | 346726 | 7119896 ~ 7121438 (+) | True | G36409 |
| XM_039796293.1 | mRNA | upstream | 2461 | 6767012 ~ 6770275 (+) | True | LOC120556653 |
| XM_039798871.1 | mRNA | upstream | 12254 | 6756944 ~ 6760482 (+) | True | bhlhe40 |
| XM_039796658.1 | mRNA | upstream | 19106 | 6648315 ~ 6753630 (+) | True | itpr1b |
| XM_039796664.1 | mRNA | upstream | 19106 | 6648315 ~ 6753630 (+) | False | itpr1b |
| XM_039796667.1 | mRNA | upstream | 19106 | 6648315 ~ 6753630 (+) | False | itpr1b |
| XM_039798415.1 | mRNA | downstream | 2556 | 6775726 ~ 6786267 (+) | True | arl8bb |
| XM_039798613.1 | mRNA | downstream | 108975 | 6882145 ~ 6941612 (+) | False | sema3fb |
| XM_039798612.1 | mRNA | downstream | 108976 | 6882146 ~ 6941612 (+) | True | sema3fb |
| XM_039798614.1 | mRNA | downstream | 108976 | 6882146 ~ 6941612 (+) | False | sema3fb |
| XM_039798615.1 | mRNA | downstream | 108976 | 6882146 ~ 6941612 (+) | False | sema3fb |
| TU48651 | other | upstream | 134349 | 6635302 ~ 6638387 (+) | False | setmar |
| TU48489 | other | upstream | 719967 | 6035100 ~ 6052769 (+) | False | rybpb |
| TU48469 | other | upstream | 848336 | 5920924 ~ 5924400 (+) | True | G36156 |
| XR_005638977.1 | other | upstream | 1838572 | 4911700 ~ 4934164 (+) | True | cdk5rap1 |
| XR_005638978.1 | other | upstream | 1838572 | 4911700 ~ 4934164 (+) | False | cdk5rap1 |
| TU48863 | other | downstream | 469039 | 7242209 ~ 7258950 (+) | False | G36458 |
| TU49260 | other | downstream | 1454592 | 8227762 ~ 8228720 (+) | True | G36744 |
| unassigned_transcript_183 | other | downstream | 1843828 | 8616998 ~ 8617069 (+) | True | trnae-cuc_4 |
| unassigned_transcript_186 | other | downstream | 1868860 | 8642030 ~ 8642101 (+) | True | trnae-cuc_5 |
| unassigned_transcript_189 | other | downstream | 1937839 | 8711009 ~ 8711080 (+) | True | trnae-cuc_6 |
