Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00073921 |
| length | 1063 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 5 |
| gene id | XLOC_037648 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007120.7 |
| NCBI id | CM002893.2 |
| chromosome length | 56459846 |
| location | 9251466 ~ 9282519 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules | biological_process |
| GO:0007157 | heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules | biological_process |
| GO:0005912 | adherens junction | cellular_component |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-060503-779 | Predicted to be involved in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules and homophilic cell adhesion via plasma membrane adhesion molecules. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in adherens junction. |
| ensembl_id | ENSDART00000146821 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00075297 | lncRNA | downstream | 200951 | 9026383 ~ 9050515 (-) | True | XLOC_037645 |
| TCONS_00073916 | lncRNA | downstream | 227197 | 9009123 ~ 9024269 (-) | False | XLOC_037644 |
| TCONS_00073924 | lncRNA | upstream | 3900 | 9286419 ~ 9289039 (-) | False | XLOC_037649 |
| TCONS_00073923 | lncRNA | upstream | 3900 | 9286419 ~ 9289060 (-) | False | XLOC_037649 |
| TCONS_00073922 | lncRNA | upstream | 3900 | 9286419 ~ 9289070 (-) | True | XLOC_037649 |
| TCONS_00073926 | lncRNA | upstream | 72853 | 9355372 ~ 9370866 (-) | True | XLOC_037651 |
| TCONS_00074962 | lncRNA | upstream | 1085861 | 10368380 ~ 10370625 (-) | True | XLOC_037663 |
| TCONS_00073920 | mRNA | downstream | 8689 | 9230446 ~ 9242777 (-) | True | XLOC_037647 |
| TCONS_00073919 | mRNA | downstream | 22525 | 9183837 ~ 9228941 (-) | True | XLOC_037646 |
| TCONS_00073917 | mRNA | downstream | 25486 | 9180620 ~ 9225980 (-) | False | XLOC_037646 |
| TCONS_00073918 | mRNA | downstream | 41635 | 9183561 ~ 9209831 (-) | False | XLOC_037646 |
| TCONS_00073914 | mRNA | downstream | 271998 | 8974276 ~ 8979468 (-) | True | XLOC_037643 |
| TCONS_00073925 | mRNA | upstream | 39905 | 9322424 ~ 9348058 (-) | True | XLOC_037650 |
| TCONS_00073927 | mRNA | upstream | 128490 | 9411009 ~ 9415000 (-) | True | XLOC_037652 |
| TCONS_00073928 | mRNA | upstream | 133141 | 9415660 ~ 9419704 (-) | True | XLOC_037653 |
| TCONS_00073929 | mRNA | upstream | 295224 | 9577743 ~ 9671244 (-) | True | XLOC_037654 |
| TCONS_00073930 | mRNA | upstream | 393407 | 9675926 ~ 9705512 (-) | False | XLOC_037655 |
| TCONS_00073901 | other | downstream | 1596165 | 7641760 ~ 7655301 (-) | True | XLOC_037633 |
| TCONS_00073897 | other | downstream | 1712443 | 7522435 ~ 7539023 (-) | True | XLOC_037632 |
| TCONS_00073875 | other | downstream | 2533665 | 6717677 ~ 6717801 (-) | True | XLOC_037618 |
| TCONS_00073868 | other | downstream | 2842195 | 6409157 ~ 6409271 (-) | True | XLOC_037613 |
| TCONS_00073841 | other | downstream | 4804362 | 4443918 ~ 4447104 (-) | True | XLOC_037598 |
| TCONS_00073935 | other | upstream | 461040 | 9743559 ~ 9805319 (-) | False | XLOC_037657 |
| TCONS_00073936 | other | upstream | 487816 | 9770335 ~ 9805319 (-) | True | XLOC_037657 |
| TCONS_00073961 | other | upstream | 1563399 | 10845918 ~ 10846549 (-) | True | XLOC_037667 |
| TCONS_00073965 | other | upstream | 2266253 | 11548772 ~ 11550397 (-) | False | XLOC_037669 |
| TCONS_00073967 | other | upstream | 2269085 | 11551604 ~ 11551704 (-) | True | XLOC_037669 |
