RNA id: TU91790


Basic Information

Item Value
RNA id TU91790
length 351
lncRNA type intronic
GC content 0.28
exon number 3
gene id G68625
representative False

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 43028617 ~ 43030425 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTTGTTAggtctacattacattataaacagaaatgttgttaggtctacattacattataaacagaaatgttgttaggcctacattacattataaacagaaatgttgttaggcctacattacattataaacagaaatgttgttaggcctacattatattataaacagaaatgttgttaggcctacattacattataaacagaaatgttgttaggcctacattatattataaacagaaatgttgttaggactacattacattataaacagaaatgttgttaggactacattacattataaacagaaatgttgttaggactacattacattataaacagaaatgttgttaggcc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91754 lncRNA upstream 4798 42964294 ~ 43023819 (+) False G68598
TU91777 lncRNA upstream 5778 43020962 ~ 43022839 (+) True G68613
TU91768 lncRNA upstream 14777 43004019 ~ 43013840 (+) True G68608
TU91770 lncRNA upstream 14777 43004019 ~ 43013840 (+) False G68608
TU91760 lncRNA upstream 15545 42997003 ~ 43013072 (+) True G68604
TU91798 lncRNA downstream 1842 43032267 ~ 43120614 (+) False G68626
TU91821 lncRNA downstream 4488 43034913 ~ 43036178 (+) True G68628
TU91834 lncRNA downstream 57291 43087716 ~ 43088425 (+) True G68640
TU91799 lncRNA downstream 57806 43088231 ~ 43099870 (+) False G68626
TU91800 lncRNA downstream 57806 43088231 ~ 43120614 (+) False G68626
XM_039804066.1 mRNA upstream 30234 42993923 ~ 42998383 (+) False LOC120561116
XM_039802507.1 mRNA upstream 372683 42644746 ~ 42655934 (+) True LOC120560229
XM_039802442.1 mRNA upstream 385556 42553941 ~ 42643061 (+) True LOC120560195
XM_039802447.1 mRNA upstream 385556 42580446 ~ 42643061 (+) False LOC120560195
XM_039802443.1 mRNA upstream 391657 42550273 ~ 42636960 (+) False LOC120560195
XM_039804072.1 mRNA downstream 353192 43383617 ~ 43403660 (+) False fhip2b
XM_039804073.1 mRNA downstream 402345 43432770 ~ 43452377 (+) True LOC120561123
XM_039804074.1 mRNA downstream 702017 43732442 ~ 43767127 (+) True LOC120561126
XM_039802056.1 mRNA downstream 738802 43769227 ~ 43775319 (+) False gpsm1a
XM_039802057.1 mRNA downstream 738841 43769266 ~ 43775319 (+) False gpsm1a
TU91748 other upstream 30355 42976146 ~ 42998262 (+) True LOC120561116
TU91740 other upstream 30355 42993778 ~ 42998262 (+) False LOC120561116
TU91750 other upstream 62997 42964040 ~ 42965620 (+) False G68598
TU91611 other upstream 631974 42322473 ~ 42396643 (+) True G68504
TU91478 other upstream 1094301 41932563 ~ 41934316 (+) False LOC120561105
TU91794 other downstream 5912 43036337 ~ 43162404 (+) True G68626
TU92811 other downstream 220262 43250687 ~ 43251323 (+) True G69274
TU93030 other downstream 779200 43809625 ~ 43810963 (+) True G69431

Expression Profile