RNA id: TU91740


Basic Information

Item Value
RNA id TU91740
length 898
RNA type TUCP
GC content 0.60
exon number 5
gene id LOC120561116
representative False

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 42976146 ~ 42998383 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

cctcttctctccttcagCTTTTTAGTATTACCTGGATCTGTAGATGGCTACCTTACTTTGCTGGCCCCAtccagtgactctgaggacccccctaggggccccggaccccctgttgaagacccCTTCTGCTGCAGTGTGCTGAGCGGCCTTCAGCGGCGCAGCGGAGCCGCTAACacactgtagacacacacacaaacgcacacacacacacacacacacacacacacagaggaggagaagcagCAGCTGTTTGTTCTCTTATCGGTCTTCTTTTTACCCGTTAAAACCCGAGTCCCGTGTCCATGGCAGCCCGGTTGTTGGAGGTGTACCTGGACCTCCTGTCGCAGCCCTGCCGCGCGATCCACATCCTGCTCGGCTGCACCAACATCCCGCACACGGTCCGCACCGTGGCGCTGCGCAAAGGAGAGAACAGGACTCCAGAATTCACAAAGTTGAACCCGATGCAGAAAGTTCCTGTCATGGTGGACAACGGCTTCGTCCTCACAGAGagtGACGCCATCATGAAGTACCTGGTCACCAAGTACGACGTCCCGCAACACTGGTATCCACGGCAACCAGAGAGACGAGCCAGAGTGGACGAGTACACGGCCtggcatcacacacacacacgacctcACGCTGCTAGAGTCTTCCTGCtggaggtgcTGATCCCCCGTCAGACGGGCTCCCCGGTGGACCAGGCCCGTCTGGGCCGGGCCCTCTCTGAGCTGGAGGACACTCTGGACCGGCTGGAGGACATGTTTCTACGGCGACAGCCCTTCCTGTGTGGTGATGACATCACCGTGGCCGACCTGCTCGCCGTCTGTGAGCTCATGCAGCCCGAGATGAGTGGGGCGGACGTCCTGCAGCAGCCGCGCGCGCTGCAGCGCTGGAAGGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91736 lncRNA upstream 51662 42941917 ~ 42942116 (+) True G68595
TU91735 lncRNA upstream 52079 42941492 ~ 42941699 (+) True G68594
XR_005639460.1 lncRNA upstream 141970 42849746 ~ 42851808 (+) True LOC120560254
TU91684 lncRNA upstream 191935 42794620 ~ 42801843 (+) True G68552
TU91683 lncRNA upstream 219286 42727020 ~ 42774492 (+) False G68552
TU91762 lncRNA downstream 348 42998610 ~ 43010624 (+) True G68605
TU91763 lncRNA downstream 348 42998610 ~ 43009780 (+) False G68605
TU91764 lncRNA downstream 348 42998610 ~ 43000815 (+) False G68605
TU91768 lncRNA downstream 5757 43004019 ~ 43013840 (+) True G68608
TU91770 lncRNA downstream 5757 43004019 ~ 43013840 (+) False G68608
XM_039802507.1 mRNA upstream 337844 42644746 ~ 42655934 (+) True LOC120560229
XM_039802449.1 mRNA upstream 350717 42550273 ~ 42643061 (+) False LOC120560195
XM_039802505.1 mRNA downstream 27003 43025265 ~ 43038474 (+) True entr1
XM_039802506.1 mRNA downstream 27005 43025267 ~ 43038473 (+) False entr1
XM_039804072.1 mRNA downstream 385355 43383617 ~ 43403660 (+) False fhip2b
XM_039804073.1 mRNA downstream 434508 43432770 ~ 43452377 (+) True LOC120561123
XM_039804074.1 mRNA downstream 734180 43732442 ~ 43767127 (+) True LOC120561126
TU91750 other upstream 28158 42964040 ~ 42965620 (+) False G68598
TU91611 other upstream 597135 42322473 ~ 42396643 (+) True G68504
TU91472 other upstream 987817 41909824 ~ 42005961 (+) True G68429
TU91783 other downstream 27036 43025298 ~ 43031225 (+) False entr1
TU91794 other downstream 38075 43036337 ~ 43162404 (+) True G68626
TU92811 other downstream 252425 43250687 ~ 43251323 (+) True G69274
TU93030 other downstream 811363 43809625 ~ 43810963 (+) True G69431

Expression Profile