RNA id: TU91834


Basic Information

Item Value
RNA id TU91834
length 432
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id G68640
representative True

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 43087716 ~ 43088425 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtctgtataataatataataatataacataataacctgtctgtctgtataatgatataataatataatataatatattgaccctgtctctctgctcctcGGCTCGGTGCAGGTCTCTCCTCAGTTTAAACACTGACGTCAGGAGGTTCATCTGAACAGGAGCTGGACTCTCTTTCTGCTGCGTCTCCTCCTTCCTATCctcctttttctcttcctgcgtctctttcttctcctcctgcgtctcctctttcttctcctccagTCTGTTGAGGTGGGAGAAGTTCTCTCTGGGCAGAACCAGACTCCTGCTctcctgCAGTGGCCTCAGGGTACGTTGTTTCAGCAGTCTCACGGTGTGTTTCAGACGctccacctgcacacacacacacacacacacacacacacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU91821 lncRNA upstream 51538 43034913 ~ 43036178 (+) True G68628
TU91790 lncRNA upstream 57291 43028617 ~ 43030425 (+) False G68625
TU91793 lncRNA upstream 57291 43028617 ~ 43030425 (+) True G68625
TU91791 lncRNA upstream 57291 43029854 ~ 43030425 (+) False G68625
TU91789 lncRNA upstream 58048 43026668 ~ 43029668 (+) True G68624
TU91840 lncRNA downstream 15554 43103979 ~ 43105662 (+) False G68645
TU91841 lncRNA downstream 15554 43103979 ~ 43105662 (+) True G68645
TU91848 lncRNA downstream 27256 43115681 ~ 43117092 (+) True G68649
TU91849 lncRNA downstream 27256 43115681 ~ 43117092 (+) False G68649
TU91850 lncRNA downstream 27256 43115681 ~ 43117092 (+) False G68649
XM_039802505.1 mRNA upstream 49242 43025265 ~ 43038474 (+) True entr1
XM_039802506.1 mRNA upstream 49243 43025267 ~ 43038473 (+) False entr1
XM_039804066.1 mRNA upstream 89333 42993923 ~ 42998383 (+) False LOC120561116
XM_039802507.1 mRNA upstream 431782 42644746 ~ 42655934 (+) True LOC120560229
XM_039802442.1 mRNA upstream 444655 42553941 ~ 42643061 (+) True LOC120560195
XM_039804072.1 mRNA downstream 295192 43383617 ~ 43403660 (+) False fhip2b
XM_039804073.1 mRNA downstream 344345 43432770 ~ 43452377 (+) True LOC120561123
XM_039804074.1 mRNA downstream 644017 43732442 ~ 43767127 (+) True LOC120561126
XM_039802056.1 mRNA downstream 680802 43769227 ~ 43775319 (+) False gpsm1a
XM_039802057.1 mRNA downstream 680841 43769266 ~ 43775319 (+) False gpsm1a
TU91783 other upstream 56491 43025298 ~ 43031225 (+) False entr1
TU91748 other upstream 89454 42976146 ~ 42998262 (+) True LOC120561116
TU91740 other upstream 89454 42993778 ~ 42998262 (+) False LOC120561116
TU91750 other upstream 122096 42964040 ~ 42965620 (+) False G68598
TU91611 other upstream 691073 42322473 ~ 42396643 (+) True G68504
TU92811 other downstream 162262 43250687 ~ 43251323 (+) True G69274
TU93030 other downstream 721200 43809625 ~ 43810963 (+) True G69431

Expression Profile