RNA id: TCONS_00074613


Basic Information

Item Value
RNA id TCONS_00074613
length 3814
RNA type mRNA
GC content 0.51
exon number 21
gene id XLOC_038035
representative False

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 37872577 ~ 38021997 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TCCTACCCCTTTCGATCCTCTTTCTTGCGTGTTAAAATCTTCATTAGGAAGTGAAACCCTGCGTAATTCGCACCCTGCGTTCATTTGCTGTATGTGATAATCGAGATCATGTCCAGATCTAACAGCGTGAGCCCACCCGGCGCTGGCGCTCCTGGACTGAGGGGAGGGACGGAGCACAGATCCGCTTGGGGCGAGTCTGAGTCCGTGGCGAACGGATGTCCATACTCGGCCAGATCCTCCTGCAAAAAGCTCATACGGTCCAACAGTCGCTGGAGAGAGGACGATGACTTCGAGCGACAACCGGGCCGAGCCACGACCACCGTCAGCCGGGTTAGCTTCAGATCCAAGTCCGCCTGGCAGGAACAAGGCGAGGAGAGCCGCAACAACAACCGATCGTCCCCGAGGTACCGAGATGGAGAAGTGAGACCCAAATCCGTGGAGCTGGGTCTGGAGGACAGGAGAACCAAGTCCAAACCAGAGGAGGAGCTCATGCCTGAAGTGAACTTTTCCATGAGCGCGTGCTGCAACAGCGTGATGCAGATTTTCAGGTCCAAGAAGTTCCAGTCGGAGAAGTTGGAGAGACTCTACCAGCGCTACTTCTTCCGCCTGAACCAGAGCAGCCTGACGATGCTGATGGCCGTGCTGGTGCTGGTGTGCGCGGTGATGCTGGGCTTCCACTGCGCCGGAGGGATGTGCCAGCTCACCTTCGTGCTGGTTTTCACCGCGGCGATCGTGCTCATCCTCACGCTGATGGTGGTGTGCAACAGGAACAGCTTCCATCAGGATCACATGTGGATAGTTTGTTATTTGCTGATTTTGCTGGTGCTGGCCGTGCAGGTAGTCGGCGTGCTGTTCGTCAAGCCGCGGAGCGCGTCTGAAGGCATCTGGTGGACCGTGTTTTTCATCCACGTCATTTACACGCTTCTGCCGGTGCGGATGAGAGCGGCGGTGATCACTGGGATTATATTGTCTGCCATTCATGTGCTCATCTCGTGGAGGTTAAACGACATGGACGTCTTCTTGTGGAAGCAGCTGGTGTCCAATGTCCTGATCTTCTCCTGCTCTAATATAGTTGGTGTGTGCACACACTACCCAGCAGAAGGTTCTCAGAGACAGGCCTTCCAGGAGACCAGAGAATGTATTCAAGCCCGTCTGCACTCGCAGAGAGAAAACCAGCAACAGGAGCGTCTCCTCCTCTCTGTGCTTCCTCGTCATGTGGCCTTGGAAATGAAAGCCGACATTAATGCCAAACAGGAGGATATGATGTTCCACAAAATCTACATTCAGAAGCATGACAATGTGAGTATCCTCTTTGCTGACATTGAGGGCTTCACCAGTCTGGCTTCCCAGTGCACTGCCCAGGAGTTAGTGATGACCCTCAACGAGCTTTTCGCACGATTCGACAAACTGGCCGCCGAGAATCACTGTCTGCGGATCAAGATTCTGGGTGACTGCTACTACTGTGTGTCAGGGCTGCCGGAGGCCCGTGCTGACCATGCGCACTGCTGTGTGGAGATGGGAGTGGACATGATAGAAGCAATCTCCTTGGTGAGGGAAGTCACCGGTGTGAACGTCAACATGCGTGTTGGAATACACAGCGGGCGCGTTCACTGCGGGGTGCTGGGATTAAGGAAATGGCAGTTTGATGTCTGGTCCAACGATGTCACCTTGGCCAACCACATGGAAGCTGGGGGCAAAGCAGGGCGTATACATATCACCAAGGCCACTCTAAACTACCTGAATGGGGATTATGATGTGGAACCTGGATCTGGTGGAGAAAGAAACGTGTATCTCAAGAAGCACAACATTGAAACCTACCTCATTGTGGGCTGCAGTCAGAAGCGGAAAGAAGAAAAGGCCATGATTGCTAAGATGAACCGACAGCGCACCAACTCGGTCACTCATAACAGCACTCACTGGACCGACCGGCCCTTCTATAATCACCTGAATGCCAATTCTGTTTCCAAGGAGATGAAGAGGATGGGATTTGAGGATCCCAAAGACAAAAACACGCAAGAGAACCTGAATCCAGAGGATGAGGTGGATGAGTTTCTGGGCCGCGCCATTGATGCTCGGAGCATCGACCGGTTAAGATCTGAACACGTCAAGAAATTTTTGCTGACCTTCAGAGAACCTGATCTGGAGAAGAAGTACTCTAAACAGGTGGATTCCAGTTTCGGTGCATATGTGGCCTGCGCCTCCCTCGTCTTTTTATTCATCTGCTTCATTCAGATCATCATTGTGCCGCATTCTGGACTGATGGTTGGTTTCTATGTGCTCTGTCTGGTCGTTCTGATGGTGGTCATGTTCATCTCAGCCATTTACTCCTGTTTTGGGTTTTTCCCCATTCCTCTGCAAACTCTGTCTAAAAGGATTGTTCAGTCCAGACTCAACAGCACCCTGGTGGGGGTTTTTACAATCGTCCTGGTCTTTATCTCTGCTTTCATTAACATTTTCACCTGCAGTACGGATGACCTGAAGACGTgtttagggcaggagtttaacatcAGCCCCAGCAATGTGAACGCTTGCCATGCCCATTTCTCTTCCCTCAACTACACACTCTGGTCTCAGAACAGGCTCTGCAACAGTTCGTCACCAACATGCAATTTCCCAGAGTACTTCTCATCATGTGTGCTGCTCAGTTTGCTGGCCTGCTCAGTTTTTCTACAGGTCAGCAGTATCGGTAAACTCTTCCTCATGCTCTTCATTGAGATCCTGTATGTGCTTATCATGGAGGTGCCCGAGGTCAGCCTTTTTGACAATGTGGACCTGCTGGTCATGGCCAATGCCCTAGCGCCTAACAATGGAACATGTATTGTGGACACCCGGGTTCCTCTAAAGATCGTGACTCCAGTGGTCATCACAGTCTTTGTGCTGGCGCTTTACCTTCATGCACAGCAGGTTGAGTCCACCGCCAGACTCGACTTTCTATGGAAGTTACAGgccacagaggaaaaggaggagatggaaGAACTTCAGGCTTACAATCGTCGGCTTCTTCACAACATCTTGCCCAAAGATGTGGCTGCACACTTTCTGGCCCGCGAGCGGAGGAATGACGAGCTGTACTACCAGTCGTGTGAATGTGTGGCTGTCATGTTTGCCTCCATCAGCAACTTTTCCGAGTTCTACGTGGAGTTGGAGGCCAATAATGAAGGTGTTGAATGCTTGAGACTTCTCAACGAGATCATCGCTGACTTTGACGAGATCATAAGTGAGGATCAGTTCCGTCAACTAGAAAAGATCAAAACCATTGGCAGCACCTACATGGCTGCATCTGGGCTTAATGACTCCACTTATGATAAAGCAGGAAGGTCACACATTCGCGCTCTAGCCGACTATGCCATGCGCCTCATGGACCAGATGAAGTACATCAATGAGCACTCTTTCAATAACTTCAAAATGAAGATCGGTCTCAACATGGGTCCTGTTGTGGCTGGAGTCATAGGAGCTCGTAAACCACAATATGACATATGGGGGAATACTGTGAATGTAGCCAGCCGTATGGACAGCACTGGGGTACCTGAGAGAATACAGgtCACAACGGACCTTTACCAGGTTCTCAGCTCCTATAACTATACACTGGAGTACAGGGGCGTTGTCAAAGTGAAAGGCAAAGGCGAAATGATGACCTACTTCCTAAACGGAGGACCCAATAACAGTTAACCCTCAGTGTCTGACCTTCAGAACATTATTAAGATGTCACAAGGAGGAGATGCTGTTGGCCAAGCTGTTGAGACGGTCATCCTTCTGGACCAATCGCAATAGGATTTGTTCAGAACCAGTCGTCACTCAGTCCAAGAGTGGCCTC

Function

GO:

id name namespace
GO:0007189 adenylate cyclase-activating G protein-coupled receptor signaling pathway biological_process
GO:0007193 adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway biological_process
GO:0045471 response to ethanol biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0006171 cAMP biosynthetic process biological_process
GO:0009190 cyclic nucleotide biosynthetic process biological_process
GO:0001932 regulation of protein phosphorylation biological_process
GO:0005886 plasma membrane cellular_component
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0046872 metal ion binding molecular_function
GO:0004016 adenylate cyclase activity molecular_function
GO:0016829 lyase activity molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0016849 phosphorus-oxygen lyase activity molecular_function

KEGG:

id description
ko00230 Purine metabolism
ko04015 Rap1 signaling pathway
ko04371 Apelin signaling pathway
ko04072 Phospholipase D signaling pathway
ko04024 cAMP signaling pathway
ko04022 cGMP-PKG signaling pathway
ko04114 Oocyte meiosis
ko04540 Gap junction
ko04611 Platelet activation
ko04062 Chemokine signaling pathway
ko04911 Insulin secretion
ko04923 Regulation of lipolysis in adipocytes
ko04912 GnRH signaling pathway
ko04913 Ovarian steroidogenesis
ko04915 Estrogen signaling pathway
ko04914 Progesterone-mediated oocyte maturation
ko04921 Oxytocin signaling pathway
ko04926 Relaxin signaling pathway
ko04935 Growth hormone synthesis, secretion and action
ko04918 Thyroid hormone synthesis
ko04928 Parathyroid hormone synthesis, secretion and action
ko04916 Melanogenesis
ko04924 Renin secretion
ko04925 Aldosterone synthesis and secretion
ko04927 Cortisol synthesis and secretion
ko04261 Adrenergic signaling in cardiomyocytes
ko04270 Vascular smooth muscle contraction
ko04970 Salivary secretion
ko04971 Gastric acid secretion
ko04972 Pancreatic secretion
ko04976 Bile secretion
ko04724 Glutamatergic synapse
ko04727 GABAergic synapse
ko04725 Cholinergic synapse
ko04728 Dopaminergic synapse
ko04726 Serotonergic synapse
ko04723 Retrograde endocannabinoid signaling
ko04750 Inflammatory mediator regulation of TRP channels
ko04211 Longevity regulating pathway
ko04213 Longevity regulating pathway - multiple species
ko04713 Circadian entrainment
ko04714 Thermogenesis
ko05200 Pathways in cancer
ko05207 Chemical carcinogenesis - receptor activation
ko05166 Human T-cell leukemia virus 1 infection
ko05163 Human cytomegalovirus infection
ko05012 Parkinson disease
ko05030 Cocaine addiction
ko05031 Amphetamine addiction
ko05032 Morphine addiction
ko05034 Alcoholism
ko05414 Dilated cardiomyopathy
ko04934 Cushing syndrome
ko01522 Endocrine resistance

ZFIN:

id description
ZDB-GENE-081104-470 Predicted to enable adenylate cyclase activity. Acts upstream of or within regulation of protein phosphorylation and response to ethanol. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in brain; head; and heart. Orthologous to human ADCY5 (adenylate cyclase 5).

Ensembl:

ensembl_id ENSDART00000124333

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00074612 lncRNA downstream 52365 37817266 ~ 37820212 (-) True XLOC_038034
TCONS_00075426 lncRNA downstream 735321 37118184 ~ 37137256 (-) True XLOC_038031
TCONS_00075007 lncRNA downstream 852106 37015729 ~ 37020471 (-) True XLOC_038030
TCONS_00075425 lncRNA downstream 912916 36956993 ~ 36959661 (-) True XLOC_038029
TCONS_00075424 lncRNA downstream 931827 36937446 ~ 36940750 (-) False XLOC_038028
TCONS_00075008 lncRNA upstream 48087 38070084 ~ 38071916 (-) True XLOC_038037
TCONS_00075427 lncRNA upstream 329584 38351581 ~ 38352885 (-) True XLOC_038040
TCONS_00075428 lncRNA upstream 536642 38558639 ~ 38559750 (-) False XLOC_038044
TCONS_00075429 lncRNA upstream 536642 38558639 ~ 38560263 (-) True XLOC_038044
TCONS_00075430 lncRNA upstream 686466 38708463 ~ 38709221 (-) True XLOC_038046
TCONS_00074608 mRNA downstream 122604 37481434 ~ 37749973 (-) False XLOC_038033
TCONS_00074607 mRNA downstream 124064 37481434 ~ 37748513 (-) False XLOC_038033
TCONS_00074606 mRNA downstream 124064 37481434 ~ 37748513 (-) False XLOC_038033
TCONS_00074609 mRNA downstream 235398 37493438 ~ 37637179 (-) False XLOC_038033
TCONS_00074605 mRNA downstream 258785 37481434 ~ 37613792 (-) False XLOC_038033
TCONS_00074615 mRNA upstream 7478 38029475 ~ 38042939 (-) False XLOC_038036
TCONS_00074616 mRNA upstream 8567 38030564 ~ 38036984 (-) False XLOC_038036
TCONS_00074617 mRNA upstream 10937 38032934 ~ 38042823 (-) True XLOC_038036
TCONS_00074618 mRNA upstream 118914 38140911 ~ 38156894 (-) True XLOC_038038
TCONS_00074620 mRNA upstream 331455 38353452 ~ 38368138 (-) True XLOC_038041
TCONS_00074610 other downstream 122658 37636957 ~ 37749919 (-) False XLOC_038033
TCONS_00074611 other downstream 122658 37747587 ~ 37749919 (-) True XLOC_038033
TCONS_00074599 other downstream 1089912 36782547 ~ 36782665 (-) True XLOC_038026
TCONS_00074598 other downstream 1101914 36770357 ~ 36770663 (-) True XLOC_038025
TCONS_00074597 other downstream 1106549 36765623 ~ 36766028 (-) True XLOC_038024
TCONS_00074619 other upstream 182410 38204407 ~ 38204528 (-) True XLOC_038039
TCONS_00074623 other upstream 447449 38469446 ~ 38469566 (-) True XLOC_038043
TCONS_00074627 other upstream 1208529 39230526 ~ 39255210 (-) False XLOC_038048
TCONS_00074636 other upstream 2059527 40081524 ~ 40350169 (-) True XLOC_038052
TCONS_00074637 other upstream 2363133 40385130 ~ 40385247 (-) True XLOC_038053

Expression Profile

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Homologous

species RNA id representative length rna type GC content exon number chromosome id location
grasscarp (Ctenopharyngodon idella) CI01000009_05278137_05361256.mRNA True 5032 mRNA 0.47 25 CI01000009 5277137 ~ 5361478 (-)
bowfin (Amia calva) AMCG00000841 True 3320 mRNA 0.53 21 CM030137.1 5081856 ~ 5115984 (+)