Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004578216.1 |
| length | 924 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 5 |
| gene id | LOC113525361 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047599.1 |
| NCBI id | CM018545.1 |
| chromosome length | 32114633 |
| location | 8295512 ~ 8316355 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU93620 | lncRNA | downstream | 100035 | 8195192 ~ 8195477 (-) | True | G78872 |
| XR_003404772.2 | lncRNA | downstream | 240014 | 8037299 ~ 8055498 (-) | True | LOC113546990 |
| TU93484 | lncRNA | downstream | 249244 | 8046040 ~ 8046268 (-) | True | G78768 |
| TU93482 | lncRNA | downstream | 249976 | 8045135 ~ 8045536 (-) | True | G78766 |
| TU93475 | lncRNA | downstream | 279106 | 8015940 ~ 8016406 (-) | True | G78759 |
| XR_004578239.1 | lncRNA | upstream | 274458 | 8590813 ~ 8606197 (-) | True | LOC117597396 |
| TU93994 | lncRNA | upstream | 298450 | 8614805 ~ 8615042 (-) | True | G79184 |
| TU94031 | lncRNA | upstream | 346573 | 8662928 ~ 8663167 (-) | False | G79220 |
| TU94033 | lncRNA | upstream | 346573 | 8662928 ~ 8664415 (-) | True | G79220 |
| TU94034 | lncRNA | upstream | 346573 | 8662928 ~ 8663436 (-) | False | G79220 |
| XM_026913239.2 | mRNA | downstream | 85359 | 8195940 ~ 8210153 (-) | True | srpx |
| XM_026913240.2 | mRNA | downstream | 85402 | 8195940 ~ 8210110 (-) | False | srpx |
| XM_034304718.1 | mRNA | downstream | 203568 | 8087620 ~ 8091944 (-) | True | LOC113547048 |
| XM_026947230.2 | mRNA | downstream | 210446 | 8081736 ~ 8085066 (-) | True | LOC113547047 |
| XM_026947169.2 | mRNA | downstream | 220106 | 8072599 ~ 8075406 (-) | True | LOC113547016 |
| XM_026912757.2 | mRNA | upstream | 24777 | 8341132 ~ 8352684 (-) | False | tfg |
| XM_026912753.2 | mRNA | upstream | 24777 | 8341132 ~ 8352682 (-) | True | tfg |
| XM_026912755.2 | mRNA | upstream | 25274 | 8341629 ~ 8352685 (-) | False | tfg |
| XM_026912754.2 | mRNA | upstream | 25274 | 8341629 ~ 8352684 (-) | False | tfg |
| XM_034304542.1 | mRNA | upstream | 25274 | 8341629 ~ 8351955 (-) | False | tfg |
| TU93319 | other | downstream | 547874 | 7744726 ~ 7747638 (-) | True | G78626 |
| TU92785 | other | downstream | 1248703 | 7043787 ~ 7046809 (-) | True | G78159 |
| TU92652 | other | downstream | 1730475 | 6529046 ~ 6565037 (-) | False | G78058 |
| TU92645 | other | downstream | 1730941 | 6529046 ~ 6564571 (-) | False | G78058 |
| TU94039 | other | upstream | 348335 | 8664690 ~ 8665579 (-) | True | G79221 |
| TU94195 | other | upstream | 455111 | 8771466 ~ 8772429 (-) | True | G79349 |
| TU94190 | other | upstream | 541464 | 8857819 ~ 8859399 (-) | False | LOC117597331 |
| TU94246 | other | upstream | 680428 | 8996783 ~ 9019448 (-) | True | G79388 |
| TU94713 | other | upstream | 1211949 | 9528304 ~ 9531668 (-) | False | LOC113525856 |
