Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU121048 |
| length | 743 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G102272 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 20282185 ~ 20356597 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU121046 | lncRNA | downstream | 19045 | 20257332 ~ 20263140 (-) | True | G102271 |
| TU121000 | lncRNA | downstream | 188383 | 20092984 ~ 20093802 (-) | True | G102225 |
| TU120999 | lncRNA | downstream | 189857 | 20089591 ~ 20092328 (-) | True | G102224 |
| TU120907 | lncRNA | downstream | 281862 | 20000101 ~ 20000323 (-) | True | G102147 |
| TU120906 | lncRNA | downstream | 283004 | 19998963 ~ 19999181 (-) | True | G102146 |
| TU121267 | lncRNA | upstream | 1618 | 20358215 ~ 20359541 (-) | True | G102434 |
| TU121262 | lncRNA | upstream | 39272 | 20395869 ~ 20414528 (-) | False | akt2 |
| TU121277 | lncRNA | upstream | 115274 | 20471871 ~ 20472745 (-) | True | G102444 |
| TU121282 | lncRNA | upstream | 121736 | 20478333 ~ 20478556 (-) | True | G102449 |
| TU121286 | lncRNA | upstream | 137660 | 20494257 ~ 20496301 (-) | True | G102453 |
| XM_026913612.2 | mRNA | downstream | 227749 | 20051332 ~ 20054436 (-) | True | LOC113526513 |
| XM_026913684.2 | mRNA | downstream | 785192 | 19407050 ~ 19496993 (-) | True | pik3c2a |
| XM_026913687.2 | mRNA | downstream | 785195 | 19407050 ~ 19496990 (-) | False | pik3c2a |
| XM_026913714.2 | mRNA | downstream | 948755 | 19309888 ~ 19333430 (-) | True | dhx34 |
| XM_026932412.2 | mRNA | downstream | 1540461 | 18734427 ~ 18741724 (-) | True | znf710a |
| XM_026913303.2 | mRNA | upstream | 5733 | 20362330 ~ 20377332 (-) | True | si:ch211-132b12.7 |
| XM_026913555.2 | mRNA | upstream | 26213 | 20382810 ~ 20389633 (-) | True | ccnp |
| XM_026913651.2 | mRNA | upstream | 39269 | 20395866 ~ 20416574 (-) | True | akt2 |
| XM_026913362.2 | mRNA | upstream | 65676 | 20422273 ~ 20453147 (-) | False | vaspb |
| XM_026913363.2 | mRNA | upstream | 65676 | 20422273 ~ 20453147 (-) | False | vaspb |
| XR_003402829.1 | other | downstream | 301926 | 19980069 ~ 19980259 (-) | True | LOC113527007 |
| XR_003402833.1 | other | downstream | 931242 | 19350762 ~ 19350943 (-) | True | LOC113527011 |
| TU119855 | other | downstream | 2085379 | 18187447 ~ 18196806 (-) | True | G101178 |
| XR_004578368.1 | other | downstream | 2195214 | 18086655 ~ 18086971 (-) | True | LOC117597604 |
| TU118530 | other | downstream | 4927548 | 15347166 ~ 15354637 (-) | True | tmem170a |
| TU121422 | other | upstream | 597005 | 20953602 ~ 20966910 (-) | True | G102566 |
| XR_004578325.1 | other | upstream | 638744 | 20995341 ~ 21013100 (-) | False | sertad3 |
| XR_004578321.1 | other | upstream | 1878106 | 22234703 ~ 22306769 (-) | False | si |
| XR_004578330.1 | other | upstream | 3234348 | 23590945 ~ 23610448 (-) | True | mmp23bb |
| TU123617 | other | upstream | 4266919 | 24623516 ~ 24711368 (-) | True | G104473 |
