Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU362971 |
| length | 573 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G306286 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 11924861 ~ 11925433 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU362969 | lncRNA | upstream | 2185 | 11922469 ~ 11922676 (+) | True | G306284 |
| XR_004580179.1 | lncRNA | upstream | 81256 | 11837338 ~ 11843605 (+) | True | LOC113537887 |
| TU362882 | lncRNA | upstream | 170830 | 11752225 ~ 11754031 (+) | True | G306199 |
| TU362821 | lncRNA | upstream | 263440 | 11648300 ~ 11661421 (+) | True | G306145 |
| TU362777 | lncRNA | upstream | 381723 | 11542933 ~ 11543138 (+) | True | G306106 |
| TU362975 | lncRNA | downstream | 4279 | 11929712 ~ 11930201 (+) | True | G306290 |
| TU362980 | lncRNA | downstream | 11751 | 11937184 ~ 11937411 (+) | True | G306295 |
| TU362985 | lncRNA | downstream | 16602 | 11942035 ~ 11942293 (+) | True | G306300 |
| TU363147 | lncRNA | downstream | 218115 | 12143548 ~ 12152169 (+) | True | G306432 |
| TU363151 | lncRNA | downstream | 228862 | 12154295 ~ 12154550 (+) | True | G306433 |
| XM_026932863.2 | mRNA | upstream | 127427 | 11794011 ~ 11797434 (+) | True | barx1 |
| XM_026932864.2 | mRNA | upstream | 127427 | 11794017 ~ 11797434 (+) | False | barx1 |
| XM_034314327.1 | mRNA | upstream | 253402 | 11608923 ~ 11671459 (+) | True | fbln2 |
| XM_026932911.2 | mRNA | downstream | 142191 | 12067624 ~ 12096756 (+) | True | alpl |
| XM_026932486.2 | mRNA | downstream | 251657 | 12177090 ~ 12185144 (+) | True | nmur3 |
| XM_026932640.2 | mRNA | downstream | 340272 | 12265705 ~ 12413095 (+) | True | ephb2b |
| XM_034314296.1 | mRNA | downstream | 340272 | 12265705 ~ 12413095 (+) | False | ephb2b |
| XM_034314297.1 | mRNA | downstream | 340272 | 12265705 ~ 12388743 (+) | False | ephb2b |
| TU362774 | other | upstream | 409048 | 11515059 ~ 11515813 (+) | True | G306103 |
| TU362623 | other | upstream | 443761 | 11480669 ~ 11481100 (+) | True | G305955 |
| TU362537 | other | upstream | 598501 | 11325604 ~ 11326360 (+) | True | G305869 |
| TU362531 | other | upstream | 609425 | 11314184 ~ 11315436 (+) | True | G305863 |
| TU362496 | other | upstream | 703346 | 11215015 ~ 11221515 (+) | False | dynlrb1 |
| TU363207 | other | downstream | 532168 | 12457601 ~ 12462536 (+) | True | G306480 |
| XR_004580240.1 | other | downstream | 2445355 | 14370788 ~ 14476385 (+) | False | asic1b |
| TU364869 | other | downstream | 2589177 | 14514610 ~ 14521147 (+) | False | gpd1b |
| XR_004580181.1 | other | downstream | 4563928 | 16489361 ~ 16501684 (+) | False | amigo3 |
| XR_004580182.1 | other | downstream | 4563928 | 16489361 ~ 16494139 (+) | False | amigo3 |
