Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU369113 |
| length | 830 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 3 |
| gene id | G311652 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 21159457 ~ 21164926 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU369109 | lncRNA | upstream | 4356 | 21150798 ~ 21155101 (+) | True | G311649 |
| XR_003403815.2 | lncRNA | upstream | 146997 | 21006350 ~ 21012460 (+) | False | LOC113538073 |
| XR_003403816.2 | lncRNA | upstream | 146997 | 21009768 ~ 21012460 (+) | True | LOC113538073 |
| TU369043 | lncRNA | upstream | 190592 | 20967715 ~ 20968865 (+) | True | G311599 |
| TU369035 | lncRNA | upstream | 207919 | 20948321 ~ 20951538 (+) | True | G311591 |
| TU369118 | lncRNA | downstream | 2054 | 21166980 ~ 21185039 (+) | True | LOC117599907 |
| XR_004580235.1 | lncRNA | downstream | 2160 | 21167086 ~ 21185034 (+) | False | LOC117599907 |
| TU369128 | lncRNA | downstream | 26242 | 21191168 ~ 21191629 (+) | True | G311665 |
| TU369497 | lncRNA | downstream | 212934 | 21377860 ~ 21391093 (+) | True | G311946 |
| TU369523 | lncRNA | downstream | 319613 | 21484539 ~ 21484817 (+) | True | G311972 |
| XM_034314489.1 | mRNA | upstream | 10173 | 21137809 ~ 21149284 (+) | True | faim2b |
| XM_034314468.1 | mRNA | upstream | 24323 | 21113434 ~ 21135134 (+) | True | LOC113537842 |
| XM_034314469.1 | mRNA | upstream | 24323 | 21113434 ~ 21135134 (+) | False | LOC113537842 |
| XM_034314335.1 | mRNA | upstream | 112880 | 21033123 ~ 21046577 (+) | True | calcoco1b |
| XM_034314359.1 | mRNA | upstream | 258046 | 20899115 ~ 20901411 (+) | False | smug1 |
| XM_034314304.1 | mRNA | downstream | 46326 | 21211252 ~ 21371670 (+) | True | lrp1aa |
| XM_034314441.1 | mRNA | downstream | 245850 | 21410776 ~ 21435824 (+) | False | alas1 |
| XM_034314442.1 | mRNA | downstream | 245850 | 21410776 ~ 21430388 (+) | False | alas1 |
| XM_026932745.2 | mRNA | downstream | 245850 | 21410776 ~ 21425183 (+) | True | alas1 |
| XM_034313987.1 | mRNA | downstream | 278373 | 21443299 ~ 21483333 (+) | True | poc1a |
| XR_004580241.1 | other | upstream | 277092 | 20870652 ~ 20882365 (+) | False | hnrnpa1a |
| TU368156 | other | upstream | 1375544 | 19768990 ~ 19783913 (+) | False | vamp3 |
| TU368157 | other | upstream | 1375544 | 19768990 ~ 19783913 (+) | False | vamp3 |
| TU368136 | other | upstream | 1642298 | 19508255 ~ 19517159 (+) | False | phf13 |
| TU367971 | other | upstream | 2071651 | 19087025 ~ 19087806 (+) | True | G310681 |
