RNA id: AMCG00002756


Basic Information

Item Value
RNA id AMCG00002756
length 438
RNA type mRNA
GC content 0.64
exon number 2
gene id AMCG00002756
representative True

Chromosome Information

Item Value
chromosome id CM030139.1
NCBI id CM030139.1
chromosome length 23121578
location 1033446 ~ 1034599 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGCGGACAAGAAACTTCTTCCAAGAGATGACGACGAGGGATCTTTGCTGTCCAGACTGGGCACGGACAGTCCCAAGCCAAGGGTCAAATTTGGGGGCATGTTCTGTAACGTGGAAGGCGCCTTTGAGAACAAGACTCTGAACTTCGACTCGTACAGCGGGGGCAGAAGGGGCTCCCCCGGGCCCCACAGGGCGGGCAGCGGGACCGACATCGGCAGCGAGGTGGACTGGACCTGCTGCAGCGAGCCGCCCGGCCGAGCCTCCCCGGCCGAGACTCCCTGTCCCCGGGGACCAGCCCCAGCCTGCCCGGGGATGAGCTCCGCGGACCTCGGAGAGCACCAGTGCTCTGCTGCCCCTGCTGGCCATGGCCTGAATGGCAGCTCCTGTCTTGCTCATGGAGAAGGGAGGCGCCACTCAGCGGTGAAATGCACAGAgtag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU174126 lncRNA downstream 135029 895012 ~ 898417 (-) False G138430
TU174128 lncRNA downstream 135029 895012 ~ 898417 (-) True G138430
TU174129 lncRNA downstream 135029 895012 ~ 898417 (-) False G138430
TU174099 lncRNA downstream 226388 805760 ~ 807058 (-) False AMCG00002743
TU174037 lncRNA downstream 228291 803573 ~ 805155 (-) True G138373
TU174258 lncRNA upstream 454963 1489562 ~ 1518053 (-) True G138535
TU174285 lncRNA upstream 898761 1933360 ~ 1933995 (-) True G138559
TU174334 lncRNA upstream 1049299 2083898 ~ 2084097 (-) True G138594
TU174435 lncRNA upstream 1467514 2502113 ~ 2502314 (-) True G138678
TU174481 lncRNA upstream 1656831 2691430 ~ 2691869 (-) True G138720
AMCG00002754 mRNA downstream 1582 1020313 ~ 1031864 (-) True AMCG00002754
AMCG00002749 mRNA downstream 81750 944861 ~ 951696 (-) True AMCG00002749
AMCG00002752 mRNA downstream 109774 920788 ~ 923672 (-) False AMCG00002752
AMCG00002751 mRNA downstream 113971 910725 ~ 919475 (-) True AMCG00002751
AMCG00002750 mRNA downstream 126000 904455 ~ 907446 (-) True AMCG00002750
AMCG00002755 mRNA upstream 948 1035547 ~ 1069394 (-) True AMCG00002755
AMCG00002758 mRNA upstream 60396 1094995 ~ 1103898 (-) True AMCG00002758
AMCG00002764 mRNA upstream 360412 1395011 ~ 1410128 (-) True AMCG00002764
AMCG00002767 mRNA upstream 506587 1541186 ~ 1551984 (-) True AMCG00002767
AMCG00002769 mRNA upstream 884441 1919040 ~ 1944943 (-) True AMCG00002769
TU174137 other downstream 108048 923010 ~ 925398 (-) False AMCG00002752
TU174135 other downstream 109212 923010 ~ 924234 (-) True AMCG00002752
TU174136 other downstream 109212 923010 ~ 924234 (-) False AMCG00002752
TU174097 other downstream 211855 812745 ~ 821591 (-) False AMCG00002743
TU174098 other downstream 222441 808155 ~ 811005 (-) False AMCG00002743
TU174506 other upstream 1683609 2718208 ~ 2719419 (-) True G138741
TU174734 other upstream 2903165 3937764 ~ 3950168 (-) False AMCG00002828
TU174755 other upstream 2967051 4001650 ~ 4002804 (-) True G138932
TU175621 other upstream 6027874 7062473 ~ 7066321 (-) True AMCG00002935
TU175710 other upstream 6314212 7348811 ~ 7352821 (-) True AMCG00002945

Expression Profile