Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00005815 |
| length | 1035 |
| RNA type | mRNA |
| GC content | 0.66 |
| exon number | 1 |
| gene id | AMCG00005815 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 11139798 ~ 11140832 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | description |
|---|---|
| K08026 | ONECUT1, HNF6; one cut domain, family member 1 (hepatocyte nuclear factor 6) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU194890 | lncRNA | upstream | 140409 | 10997649 ~ 10999389 (+) | True | G154722 |
| TU194697 | lncRNA | upstream | 425091 | 10690143 ~ 10714707 (+) | False | AMCG00005835 |
| TU194699 | lncRNA | upstream | 445845 | 10690143 ~ 10693953 (+) | True | AMCG00005835 |
| TU194696 | lncRNA | upstream | 471537 | 10667998 ~ 10668261 (+) | True | G154583 |
| TU194687 | lncRNA | upstream | 563361 | 10575979 ~ 10576437 (+) | True | G154574 |
| TU194957 | lncRNA | downstream | 33563 | 11174395 ~ 11180237 (+) | True | G154775 |
| TU194983 | lncRNA | downstream | 179132 | 11319964 ~ 11361770 (+) | False | G154798 |
| TU195006 | lncRNA | downstream | 221173 | 11362005 ~ 11362233 (+) | True | G154815 |
| TU195007 | lncRNA | downstream | 229592 | 11370424 ~ 11370912 (+) | True | G154816 |
| TU195024 | lncRNA | downstream | 237948 | 11378780 ~ 11379289 (+) | True | G154831 |
| AMCG00005812 | mRNA | upstream | 36575 | 11098409 ~ 11103223 (+) | True | AMCG00005812 |
| AMCG00005813 | mRNA | upstream | 42430 | 11092831 ~ 11097368 (+) | True | AMCG00005813 |
| AMCG00005840 | mRNA | upstream | 129937 | 11006798 ~ 11009861 (+) | False | AMCG00005840 |
| AMCG00005869 | mRNA | upstream | 177111 | 10929794 ~ 10962687 (+) | True | AMCG00005869 |
| AMCG00005868 | mRNA | upstream | 216251 | 10919948 ~ 10923547 (+) | True | AMCG00005868 |
| AMCG00005816 | mRNA | downstream | 30182 | 11171014 ~ 11172074 (+) | True | AMCG00005816 |
| AMCG00005854 | mRNA | downstream | 64555 | 11205387 ~ 11206589 (+) | True | AMCG00005854 |
| AMCG00005853 | mRNA | downstream | 102007 | 11242839 ~ 11243798 (+) | True | AMCG00005853 |
| AMCG00005873 | mRNA | downstream | 183999 | 11324831 ~ 11331121 (+) | True | AMCG00005873 |
| AMCG00005874 | mRNA | downstream | 198772 | 11339604 ~ 11343604 (+) | True | AMCG00005874 |
| TU194931 | other | upstream | 53787 | 11083161 ~ 11086011 (+) | True | G154756 |
| TU194894 | other | upstream | 129444 | 11007544 ~ 11010354 (+) | True | AMCG00005840 |
| TU194757 | other | upstream | 224069 | 10913397 ~ 10915729 (+) | True | G154636 |
| TU194711 | other | upstream | 409589 | 10722332 ~ 10730209 (+) | False | AMCG00005834 |
| TU194591 | other | upstream | 623408 | 10512504 ~ 10516390 (+) | True | G154499 |
| TU194985 | other | downstream | 179132 | 11319964 ~ 11325074 (+) | True | G154798 |
| TU195111 | other | downstream | 461595 | 11602427 ~ 11605275 (+) | False | AMCG00005886 |
| TU195202 | other | downstream | 762554 | 11903386 ~ 11905844 (+) | False | AMCG00005895 |
| TU195527 | other | downstream | 1550984 | 12691816 ~ 12696319 (+) | False | AMCG00005987 |
| TU195528 | other | downstream | 1551928 | 12692760 ~ 12696319 (+) | False | AMCG00005987 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00031677 | True | 1326 | mRNA | 0.61 | 2 | NC_007113.7 | 57504073 ~ 57563888 (+) |
| rainbow trout (Oncorhynchus mykiss) | TU623156 | True | 1029 | lncRNA | 0.57 | 1 | NC_048570.1 | 79525503 ~ 79526531 (-) |
