RNA id: AMCG00008818



Basic Information


Item Value
RNA id AMCG00008818
length 333
RNA type mRNA
GC content 0.66
exon number 1
gene id AMCG00008818
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 12653613 ~ 12653945 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGAGTCCTTGTTAGTGGTAAACATCCAGTTCCTTATTTATGCACATGGGGAACCTGTGTCTGACAAGAGCGTGTCCCCCACGCACCGGTGGGGCCCcggcggagagagagagcgcgcgCGCGCGAGACGGGGACCCCCGGAGCCGCTCGGTCCCCTCTGCGTGCGCGTGCGTGCGCGGGCGCGGGCCGCCATTGTGTATTTTGGCGCGCGCGCGTGTGAGTGCGCAGTccggacagacagagaggcgCTCGAGCAGCTGCGGCGGTGGAGGGAAGCGGCGGAGACGCGGCTGCACTCACATTCGGACGGTTATTCGCTCGGGAGTGAGTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU64692 lncRNA downstream 48473 12601322 ~ 12605140 (-) False AMCG00008815
TU64684 lncRNA downstream 103996 12547400 ~ 12549617 (-) True G51707
TU64683 lncRNA downstream 113269 12539607 ~ 12540344 (-) True G51706
TU64677 lncRNA downstream 149934 12503462 ~ 12503679 (-) True G51700
TU64668 lncRNA downstream 177414 12454919 ~ 12476199 (-) True G51693
TU64716 lncRNA upstream 3281 12657226 ~ 12660117 (-) True G51724
TU64717 lncRNA upstream 4539 12658484 ~ 12660117 (-) False G51724
TU64823 lncRNA upstream 253376 12907321 ~ 12908333 (-) True G51809
TU64825 lncRNA upstream 266600 12920545 ~ 12920791 (-) True G51811
TU64876 lncRNA upstream 269259 12923204 ~ 12924656 (-) True G51851
AMCG00008817 mRNA downstream 1795 12641987 ~ 12651818 (-) True AMCG00008817
AMCG00008815 mRNA downstream 48353 12601291 ~ 12605260 (-) True AMCG00008815
AMCG00008802 mRNA downstream 394282 12248300 ~ 12259331 (-) True AMCG00008802
AMCG00008801 mRNA downstream 413554 12237425 ~ 12240059 (-) True AMCG00008801
AMCG00008796 mRNA downstream 492091 12150161 ~ 12161522 (-) True AMCG00008796
AMCG00008816 mRNA upstream 11890 12665835 ~ 12668432 (-) True AMCG00008816
AMCG00008822 mRNA upstream 63172 12717117 ~ 12721189 (-) True AMCG00008822
AMCG00008823 mRNA upstream 71579 12725524 ~ 12735479 (-) True AMCG00008823
AMCG00008821 mRNA upstream 85228 12739173 ~ 12745962 (-) True AMCG00008821
AMCG00008827 mRNA upstream 193062 12847007 ~ 12856225 (-) True AMCG00008827
TU64350 other downstream 1327254 11320810 ~ 11326359 (-) False AMCG00008777
TU64340 other downstream 1357863 11235642 ~ 11295750 (-) False AMCG00008777
TU64128 other downstream 1854459 10797632 ~ 10799154 (-) True G51250
TU64105 other downstream 1941128 10680278 ~ 10712485 (-) False G51241
TU64811 other upstream 236866 12890811 ~ 12891597 (-) True G51797
TU64813 other upstream 241390 12895335 ~ 12897134 (-) True G51799
TU64897 other upstream 346881 13000826 ~ 13001888 (-) True G51867
TU64926 other upstream 436592 13090537 ~ 13097934 (-) True AMCG00008845
TU65001 other upstream 603761 13257706 ~ 13261822 (-) True AMCG00008853

Expression Profile