Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00008816 |
| length | 1386 |
| RNA type | mRNA |
| GC content | 0.66 |
| exon number | 3 |
| gene id | AMCG00008816 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 12665835 ~ 12668432 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005667 | transcription regulator complex | cellular_component |
| GO:0043565 | sequence-specific DNA binding | molecular_function |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| GO:0046982 | protein heterodimerization activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU64716 | lncRNA | downstream | 5718 | 12657226 ~ 12660117 (-) | True | G51724 |
| TU64717 | lncRNA | downstream | 5718 | 12658484 ~ 12660117 (-) | False | G51724 |
| TU64692 | lncRNA | downstream | 60695 | 12601322 ~ 12605140 (-) | False | AMCG00008815 |
| TU64684 | lncRNA | downstream | 116218 | 12547400 ~ 12549617 (-) | True | G51707 |
| TU64683 | lncRNA | downstream | 125491 | 12539607 ~ 12540344 (-) | True | G51706 |
| TU64823 | lncRNA | upstream | 238889 | 12907321 ~ 12908333 (-) | True | G51809 |
| TU64825 | lncRNA | upstream | 252113 | 12920545 ~ 12920791 (-) | True | G51811 |
| TU64876 | lncRNA | upstream | 254772 | 12923204 ~ 12924656 (-) | True | G51851 |
| TU64906 | lncRNA | upstream | 353592 | 13022024 ~ 13023104 (-) | True | G51875 |
| TU64988 | lncRNA | upstream | 467300 | 13135732 ~ 13136309 (-) | False | AMCG00008844 |
| AMCG00008818 | mRNA | downstream | 11890 | 12653613 ~ 12653945 (-) | True | AMCG00008818 |
| AMCG00008817 | mRNA | downstream | 14017 | 12641987 ~ 12651818 (-) | True | AMCG00008817 |
| AMCG00008815 | mRNA | downstream | 60575 | 12601291 ~ 12605260 (-) | True | AMCG00008815 |
| AMCG00008802 | mRNA | downstream | 406504 | 12248300 ~ 12259331 (-) | True | AMCG00008802 |
| AMCG00008801 | mRNA | downstream | 425776 | 12237425 ~ 12240059 (-) | True | AMCG00008801 |
| AMCG00008822 | mRNA | upstream | 48685 | 12717117 ~ 12721189 (-) | True | AMCG00008822 |
| AMCG00008823 | mRNA | upstream | 57092 | 12725524 ~ 12735479 (-) | True | AMCG00008823 |
| AMCG00008821 | mRNA | upstream | 70741 | 12739173 ~ 12745962 (-) | True | AMCG00008821 |
| AMCG00008827 | mRNA | upstream | 178575 | 12847007 ~ 12856225 (-) | True | AMCG00008827 |
| AMCG00008826 | mRNA | upstream | 195191 | 12863623 ~ 12884668 (-) | True | AMCG00008826 |
| TU64350 | other | downstream | 1339476 | 11320810 ~ 11326359 (-) | False | AMCG00008777 |
| TU64340 | other | downstream | 1370085 | 11235642 ~ 11295750 (-) | False | AMCG00008777 |
| TU64128 | other | downstream | 1866681 | 10797632 ~ 10799154 (-) | True | G51250 |
| TU64105 | other | downstream | 1953350 | 10680278 ~ 10712485 (-) | False | G51241 |
| TU64811 | other | upstream | 222379 | 12890811 ~ 12891597 (-) | True | G51797 |
| TU64813 | other | upstream | 226903 | 12895335 ~ 12897134 (-) | True | G51799 |
| TU64897 | other | upstream | 332394 | 13000826 ~ 13001888 (-) | True | G51867 |
| TU64926 | other | upstream | 422105 | 13090537 ~ 13097934 (-) | True | AMCG00008845 |
| TU65001 | other | upstream | 589274 | 13257706 ~ 13261822 (-) | True | AMCG00008853 |
