RNA id: AMCG00009591



Basic Information


Item Value
RNA id AMCG00009591
length 945
RNA type mRNA
GC content 0.53
exon number 12
gene id AMCG00009591
representative True

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 42290154 ~ 42298090 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


CTGATTTGCGTGGCGCAGGGGATAAATACACTGCCTGGAAATGGCAGGATTCATCGACGAGAGACGAGCATTGCTGTAAAGATGAGGACCTGCAAGCCAGTTCTCACCCTCTTGCCCGTGCTGCTGGCAGCTCAGCTGTCTGGAATAGCTGCTAGATCTCTCCTTGACAACTCGGAGGAGCTGAATGGAGAGCAGCTGTTCCATCAGAGGGAACTGGAAGCAGCGGACTTAAACGATGACCTGGAGGAACCTGAAGATCAGAAACCCAGAGTGCAAGGAAAGAGAGAAGAGGATTCAGAGGACTACAATGAATACAATGACATTGGGGAGCATGGAGAGAAGGGGCTGGAAAAGAGAGAGTATGAAGCAGAGTCAGCTGACAGTGAGGCACGCAGAGTGGTAGACGAGAGAGAAATAAGTAAGTACAGCATTGAGAAAGAGGCTGGGGTGGGCTGGGGTGGGCTTGCTGACCCTGCGCTGGGGAAGAGAGCGAACACTGACTCTGAGGTGGTCCTGACATACTCCAACGTGATGAAAAGGGAGGACCTGGCTAAAAGATTTTACCGCAACCGCAGCATCTGCATTCGTTcgGGCTGCTACTATGATCCCATAGTCTGGGTTACAGCTCTTTACGAGTCCATAAAGAAGTATGCCTTCTACAGTCTGAGAGCTCAGGTCCAGCAGGAATTCTTTGCCACTTCATGTAGACGCTACGGCTACTATAACTTCTACCGCTACCGCTATGGCAGACGCTACTGCAGGCGTTGGACTGTGATGGATGTGCAGGGGGCCAATTCCTCCTGGCTGTACAGCTTTTCTGAGGATCTGAGTTCTGTCACCTGGTGGCCCCACCCACACGGAGCCTCGATGATGATGTTCATGTTCACCCAGGGGCTTCAGCCCAATGAGATGAAGAGCACGGGGGCAGAGACAGGAGGCAGGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU72317 lncRNA upstream 202009 42085279 ~ 42088145 (+) True G57843
TU72251 lncRNA upstream 450688 41839165 ~ 41839466 (+) True G57792
TU72233 lncRNA upstream 472359 41815921 ~ 41817795 (+) True G57775
TU72228 lncRNA upstream 540010 41749555 ~ 41750144 (+) True G57770
TU72199 lncRNA upstream 691032 41596229 ~ 41599122 (+) True AMCG00009563
TU72439 lncRNA downstream 104145 42402235 ~ 42402452 (+) True G57940
TU72446 lncRNA downstream 117500 42415590 ~ 42418109 (+) True G57945
TU72447 lncRNA downstream 120051 42418141 ~ 42418505 (+) True G57946
TU72448 lncRNA downstream 120500 42418590 ~ 42420823 (+) True G57947
TU72449 lncRNA downstream 129752 42427842 ~ 42428048 (+) True G57948
AMCG00009593 mRNA upstream 9725 42275999 ~ 42280429 (+) True AMCG00009593
AMCG00009586 mRNA upstream 18957 42266822 ~ 42271197 (+) True AMCG00009586
AMCG00009587 mRNA upstream 65635 42213604 ~ 42224519 (+) True AMCG00009587
AMCG00009588 mRNA upstream 78606 42193294 ~ 42211548 (+) True AMCG00009588
AMCG00009580 mRNA upstream 114454 42170346 ~ 42175700 (+) True AMCG00009580
AMCG00009594 mRNA downstream 87409 42385499 ~ 42399331 (+) True AMCG00009594
AMCG00009600 mRNA downstream 116115 42414205 ~ 42415545 (+) True AMCG00009600
AMCG00009595 mRNA downstream 148867 42446957 ~ 42463730 (+) True AMCG00009595
AMCG00009604 mRNA downstream 190347 42488437 ~ 42489969 (+) True AMCG00009604
AMCG00009606 mRNA downstream 233627 42531717 ~ 42546719 (+) True AMCG00009606
TU72303 other upstream 211913 42036018 ~ 42078241 (+) True G57830
TU72035 other upstream 1295495 40990802 ~ 40994659 (+) True G57604
TU71881 other upstream 2185206 40102383 ~ 40104948 (+) False AMCG00009516
TU71802 other upstream 2340954 39948006 ~ 39949200 (+) True G57430
TU71670 other upstream 2853159 39434900 ~ 39436995 (+) True AMCG00009480
TU72919 other downstream 1634862 43932952 ~ 43935762 (+) True G58324
TU73161 other downstream 2088407 44386497 ~ 44387964 (+) False G58522
TU73232 other downstream 2269275 44567365 ~ 44570531 (+) True AMCG00009694
TU73244 other downstream 2286472 44584562 ~ 44599328 (+) False AMCG00009700
TU73251 other downstream 2334660 44632750 ~ 44651967 (+) True G58600

Expression Profile