RNA id: TU133195



Basic Information


Item Value
RNA id TU133195
length 209
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G106457
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 22090057 ~ 22090265 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ctggtttgaaggcttcAAGTTTGTGCACAgaatcttctttgtaagcaggggttccaccgtagttacttgaagacaaagtctttgaggaaagcagggccctgtttgttccaagggtcaagtttcttaagactcaatagctatttaaatgactgacactttcgtattcagtcgacttagtcaattgtccagctgtaaaactccactgatca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU133192 lncRNA upstream 27403 21932604 ~ 22062654 (+) True G106455
TU133180 lncRNA upstream 161480 21926899 ~ 21928577 (+) True G106443
TU133122 lncRNA upstream 848564 21215621 ~ 21241493 (+) True G106391
TU133088 lncRNA upstream 955444 21134255 ~ 21134613 (+) True G106362
TU133087 lncRNA upstream 957627 21131698 ~ 21132430 (+) True G106361
TU133202 lncRNA downstream 221449 22311714 ~ 22311963 (+) True G106464
TU133216 lncRNA downstream 453014 22543279 ~ 22544072 (+) True G106478
TU133215 lncRNA downstream 453919 22544184 ~ 22544435 (+) True G106477
TU133217 lncRNA downstream 456899 22547164 ~ 22547407 (+) True G106479
TU133219 lncRNA downstream 463994 22554259 ~ 22554490 (+) True G106481
AMCG00011389 mRNA upstream 165799 21923959 ~ 21924258 (+) True AMCG00011389
AMCG00011390 mRNA upstream 213724 21868788 ~ 21876333 (+) True AMCG00011390
AMCG00011388 mRNA upstream 292094 21792528 ~ 21797963 (+) True AMCG00011388
AMCG00011387 mRNA upstream 704194 21319424 ~ 21385863 (+) True AMCG00011387
AMCG00011381 mRNA upstream 853302 21227210 ~ 21236755 (+) True AMCG00011381
AMCG00011392 mRNA downstream 413707 22503972 ~ 22506745 (+) True AMCG00011392
AMCG00011394 mRNA downstream 509653 22599918 ~ 22603575 (+) True AMCG00011394
AMCG00011395 mRNA downstream 513751 22604016 ~ 22630597 (+) True AMCG00011395
AMCG00011397 mRNA downstream 555767 22646032 ~ 22650834 (+) True AMCG00011397
AMCG00011396 mRNA downstream 579476 22669741 ~ 22691805 (+) True AMCG00011396
TU132939 other upstream 1722834 20361208 ~ 20367223 (+) True G106242
TU132823 other upstream 1750970 20296011 ~ 20339087 (+) False AMCG00011365
TU132810 other upstream 1927091 20095229 ~ 20162966 (+) False G106139
TU133378 other downstream 1251043 23341308 ~ 23341765 (+) True G106613
TU133383 other downstream 1265797 23356062 ~ 23356559 (+) True G106618
TU133489 other downstream 1658409 23748674 ~ 23753002 (+) True G106711
TU133992 other downstream 4265902 26356167 ~ 26360775 (+) True AMCG00011476
TU134100 other downstream 4680173 26770438 ~ 26771214 (+) True G107202

Expression Profile