RNA id: TU133217



Basic Information


Item Value
RNA id TU133217
length 244
lncRNA type inter_gene
GC content 0.64
exon number 1
gene id G106479
representative True

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 22547164 ~ 22547407 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCTGGAAGGGGCTGGAGGGCCCAGAGCTGGCAGGAGAGTTGGGATAGGTGCCGCTGCTGGCCGGAGATGGGGGGTAGGGCGAGTTGGGCGAGATGGGGAAGGAGTTGCCCCCACTGTGCTGCTGGAAAGACTCTGGAAAGGTAGCATTGAGAGGCATGTGCGGCTCGTTGTGGCTCAGGTTGCGGAACTGGACCAGTAGGCTGTGCTGGGGGTTGAACTCGCTGTGCCTGGGCACCAACACCGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU133215 lncRNA upstream 2729 22544184 ~ 22544435 (+) True G106477
TU133216 lncRNA upstream 3092 22543279 ~ 22544072 (+) True G106478
TU133202 lncRNA upstream 235201 22311714 ~ 22311963 (+) True G106464
TU133195 lncRNA upstream 456899 22090057 ~ 22090265 (+) True G106457
TU133192 lncRNA upstream 484510 21932604 ~ 22062654 (+) True G106455
TU133219 lncRNA downstream 6852 22554259 ~ 22554490 (+) True G106481
TU133223 lncRNA downstream 16692 22564099 ~ 22567261 (+) True G106485
TU133254 lncRNA downstream 145330 22692737 ~ 22694844 (+) True G106513
TU133347 lncRNA downstream 315201 22862608 ~ 22862952 (+) True G106586
TU133349 lncRNA downstream 381722 22929129 ~ 22935544 (+) True G106588
AMCG00011392 mRNA upstream 40419 22503972 ~ 22506745 (+) True AMCG00011392
AMCG00011389 mRNA upstream 622906 21923959 ~ 21924258 (+) True AMCG00011389
AMCG00011390 mRNA upstream 670831 21868788 ~ 21876333 (+) True AMCG00011390
AMCG00011388 mRNA upstream 749201 21792528 ~ 21797963 (+) True AMCG00011388
AMCG00011387 mRNA upstream 1161301 21319424 ~ 21385863 (+) True AMCG00011387
AMCG00011394 mRNA downstream 52511 22599918 ~ 22603575 (+) True AMCG00011394
AMCG00011395 mRNA downstream 56609 22604016 ~ 22630597 (+) True AMCG00011395
AMCG00011397 mRNA downstream 98625 22646032 ~ 22650834 (+) True AMCG00011397
AMCG00011396 mRNA downstream 122334 22669741 ~ 22691805 (+) True AMCG00011396
AMCG00011404 mRNA downstream 197114 22744521 ~ 22749846 (+) True AMCG00011404
TU132939 other upstream 2179941 20361208 ~ 20367223 (+) True G106242
TU132823 other upstream 2208077 20296011 ~ 20339087 (+) False AMCG00011365
TU132810 other upstream 2384198 20095229 ~ 20162966 (+) False G106139
TU133378 other downstream 793901 23341308 ~ 23341765 (+) True G106613
TU133383 other downstream 808655 23356062 ~ 23356559 (+) True G106618
TU133489 other downstream 1201267 23748674 ~ 23753002 (+) True G106711
TU133992 other downstream 3808760 26356167 ~ 26360775 (+) True AMCG00011476
TU134100 other downstream 4223031 26770438 ~ 26771214 (+) True G107202

Expression Profile