Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00014877 |
| length | 524 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 5 |
| gene id | AMCG00014877 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 38177874 ~ 38180456 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0019789 | SUMO transferase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU92327 | lncRNA | upstream | 245079 | 37932522 ~ 37932795 (+) | True | G73944 |
| TU92322 | lncRNA | upstream | 293186 | 37876261 ~ 37884688 (+) | True | G73939 |
| TU92298 | lncRNA | upstream | 356512 | 37821086 ~ 37821362 (+) | True | G73917 |
| TU92294 | lncRNA | upstream | 431687 | 37745983 ~ 37746187 (+) | True | G73914 |
| TU92269 | lncRNA | upstream | 469073 | 37708286 ~ 37708801 (+) | True | G73889 |
| TU92477 | lncRNA | downstream | 131020 | 38311476 ~ 38313617 (+) | True | G74067 |
| TU92590 | lncRNA | downstream | 468466 | 38648922 ~ 38649249 (+) | True | G74157 |
| TU92592 | lncRNA | downstream | 470941 | 38651397 ~ 38655398 (+) | True | G74159 |
| TU92634 | lncRNA | downstream | 531252 | 38711708 ~ 38712076 (+) | True | G74192 |
| TU92637 | lncRNA | downstream | 533209 | 38713665 ~ 38714115 (+) | True | G74195 |
| AMCG00014876 | mRNA | upstream | 1708 | 38169869 ~ 38176166 (+) | True | AMCG00014876 |
| AMCG00014872 | mRNA | upstream | 89839 | 38073684 ~ 38088035 (+) | True | AMCG00014872 |
| AMCG00014873 | mRNA | upstream | 150614 | 38023589 ~ 38027260 (+) | True | AMCG00014873 |
| AMCG00014868 | mRNA | upstream | 210968 | 37965377 ~ 37966906 (+) | True | AMCG00014868 |
| AMCG00014869 | mRNA | upstream | 221358 | 37954370 ~ 37956516 (+) | True | AMCG00014869 |
| AMCG00014882 | mRNA | downstream | 40065 | 38220521 ~ 38227829 (+) | True | AMCG00014882 |
| AMCG00014881 | mRNA | downstream | 54241 | 38234697 ~ 38244140 (+) | True | AMCG00014881 |
| AMCG00014880 | mRNA | downstream | 72506 | 38252962 ~ 38257417 (+) | True | AMCG00014880 |
| AMCG00014884 | mRNA | downstream | 170791 | 38351247 ~ 38359131 (+) | True | AMCG00014884 |
| AMCG00014887 | mRNA | downstream | 277913 | 38458369 ~ 38466227 (+) | True | AMCG00014887 |
| TU92227 | other | upstream | 659468 | 37518108 ~ 37518406 (+) | True | G73850 |
| TU91690 | other | upstream | 2783225 | 35390634 ~ 35394649 (+) | False | AMCG00014836 |
| TU91622 | other | upstream | 3217427 | 34942011 ~ 34960447 (+) | True | G73343 |
| TU91608 | other | upstream | 3397284 | 34780122 ~ 34780590 (+) | True | G73329 |
| TU91569 | other | upstream | 3938474 | 34238934 ~ 34239400 (+) | True | G73292 |
| TU92541 | other | downstream | 251918 | 38432374 ~ 38432861 (+) | True | G74114 |
| TU92678 | other | downstream | 630237 | 38810693 ~ 38811128 (+) | True | G74227 |
| TU92814 | other | downstream | 1155812 | 39336268 ~ 39475819 (+) | True | G74348 |
| TU92948 | other | downstream | 1426431 | 39606887 ~ 39621186 (+) | True | AMCG00014913 |
| TU93044 | other | downstream | 1684626 | 39865082 ~ 39872003 (+) | False | AMCG00014923 |
